Analysis of interatomic Contacts of Structural Units in PDB entry:
6QWI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QWI entry

There are 2 chains in PDB entry 6QWI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 448
B
 MET 1ARG 448
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 6QWI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 22Right-handed alpha
Helix 2
AA2
A
26 30Right-handed 310
Helix 3
AA3
A
33 40Right-handed alpha
Helix 4
AA4
A
45 49Right-handed 310
Helix 5
AA5
A
56 72Right-handed alpha
Helix 6
AA6
A
81 86Right-handed alpha
Helix 7
AA7
A
94 111Right-handed alpha
Helix 8
AA8
A
125 131Right-handed alpha
Helix 9
AA9
A
132 136Right-handed 310
Helix 10
AB1
A
137 154Right-handed alpha
Helix 11
AB2
A
166 176Right-handed alpha
Helix 12
AB3
A
186 211Right-handed alpha
Helix 13
AB4
A
232 247Right-handed alpha
Helix 14
AB5
A
247 257Right-handed alpha
Helix 15
AB6
A
260 269Right-handed alpha
Helix 16
AB7
A
279 285Right-handed alpha
Helix 17
AB8
A
330 340Right-handed alpha
Helix 18
AB9
A
341 344Right-handed 310
Helix 19
AC1
A
368 388Right-handed alpha
Helix 20
AC2
A
405 409Right-handed 310
Helix 21
AC3
A
429 440Right-handed alpha
Helix 22
AC4
B
17 22Right-handed alpha
Helix 23
AC5
B
26 30Right-handed 310
Helix 24
AC6
B
33 40Right-handed alpha
Helix 25
AC7
B
45 49Right-handed 310
Helix 26
AC8
B
56 72Right-handed alpha
Helix 27
AC9
B
81 86Right-handed alpha
Helix 28
AD1
B
94 111Right-handed alpha
Helix 29
AD2
B
125 131Right-handed alpha
Helix 30
AD3
B
132 136Right-handed 310
Helix 31
AD4
B
137 154Right-handed alpha
Helix 32
AD5
B
166 176Right-handed alpha
Helix 33
AD6
B
186 211Right-handed alpha
Helix 34
AD7
B
232 247Right-handed alpha
Helix 35
AD8
B
247 257Right-handed alpha
Helix 36
AD9
B
260 269Right-handed alpha
Helix 37
AE1
B
279 285Right-handed alpha
Helix 38
AE2
B
330 340Right-handed alpha
Helix 39
AE3
B
341 344Right-handed 310
Helix 40
AE4
B
368 387Right-handed alpha
Helix 41
AE5
B
405 409Right-handed 310
Helix 42
AE6
B
429 442Right-handed alpha
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There are 8 sheets in PDB entry 6QWI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 5first strand
Strand 2
A
443 446anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 15first strand
Strand 2
A
75 79parallel
Strand 3
A
114 120parallel
Strand 4
A
160 165parallel
Strand 5
A
216 220parallel
Strand 6
A
290 294parallel
Strand 7
A
347 352parallel
Strand 8
A
392 398parallel
Strand 9
A
11 15parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 228first strand
Strand 2
A
299 303parallel
Strand 3
A
312 315anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
417 419first strand
Strand 2
A
426 428anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 5first strand
Strand 2
B
443 445anti-parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 15first strand
Strand 2
B
75 79parallel
Strand 3
B
114 120parallel
Strand 4
B
160 165parallel
Strand 5
B
216 220parallel
Strand 6
B
290 294parallel
Strand 7
B
347 352parallel
Strand 8
B
391 398parallel
Strand 9
B
11 15parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
226 228first strand
Strand 2
B
299 303parallel
Strand 3
B
312 315anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
417 420first strand
Strand 2
B
425 428anti-parallel
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