Analysis of interatomic Contacts of Structural Units in PDB entry:
6QWS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QWS entry

There is 1 chain in PDB entry 6QWS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 479ARG 1727
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 82 helices in PDB entry 6QWS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
516 520Right-handed 310
Helix 2
AA2
A
531 543Right-handed alpha
Helix 3
AA3
A
556 572Right-handed alpha
Helix 4
AA4
A
592 608Right-handed alpha
Helix 5
AA5
A
623 629Right-handed alpha
Helix 6
AA6
A
637 648Right-handed alpha
Helix 7
AA7
A
650 655Right-handed alpha
Helix 8
AA8
A
665 670Right-handed 310
Helix 9
AA9
A
672 691Right-handed alpha
Helix 10
AB1
A
705 713Right-handed alpha
Helix 11
AB2
A
725 729Right-handed 310
Helix 12
AB3
A
746 764Right-handed alpha
Helix 13
AB4
A
779 794Right-handed alpha
Helix 14
AB5
A
797 802Right-handed alpha
Helix 15
AB6
A
805 820Right-handed alpha
Helix 16
AB7
A
823 828Right-handed 310
Helix 17
AB8
A
842 854Right-handed alpha
Helix 18
AB9
A
895 904Right-handed alpha
Helix 19
AC1
A
925 934Right-handed alpha
Helix 20
AC2
A
942 945Right-handed 310
Helix 21
AC3
A
946 957Right-handed alpha
Helix 22
AC4
A
962 971Right-handed alpha
Helix 23
AC5
A
973 980Right-handed alpha
Helix 24
AC6
A
995 997Right-handed 310
Helix 25
AC7
A
998 1016Right-handed alpha
Helix 26
AC8
A
1031 1041Right-handed alpha
Helix 27
AC9
A
1043 1054Right-handed alpha
Helix 28
AD1
A
1059 1069Right-handed alpha
Helix 29
AD2
A
1070 1074Right-handed 310
Helix 30
AD3
A
1082 1091Right-handed alpha
Helix 31
AD4
A
1103 1117Right-handed alpha
Helix 32
AD5
A
1123 1152Right-handed alpha
Helix 33
AD6
A
1153 1169Right-handed alpha
Helix 34
AD7
A
1176 1181Right-handed 310
Helix 35
AD8
A
1185 1193Right-handed alpha
Helix 36
AD9
A
1198 1203Right-handed 310
Helix 37
AE1
A
1206 1215Right-handed alpha
Helix 38
AE2
A
1216 1218Right-handed 310
Helix 39
AE3
A
1219 1229Right-handed alpha
Helix 40
AE4
A
1260 1265Right-handed alpha
Helix 41
AE5
A
1292 1296Right-handed alpha
Helix 42
AE6
A
1360 1364Right-handed 310
Helix 43
AE7
A
1366 1372Right-handed alpha
Helix 44
AE8
A
1380 1392Right-handed alpha
Helix 45
AE9
A
1406 1420Right-handed alpha
Helix 46
AF1
A
1433 1448Right-handed alpha
Helix 47
AF2
A
1463 1474Right-handed alpha
Helix 48
AF3
A
1480 1489Right-handed alpha
Helix 49
AF4
A
1494 1498Right-handed 310
Helix 50
AF5
A
1507 1513Right-handed 310
Helix 51
AF6
A
1516 1533Right-handed alpha
Helix 52
AF7
A
1548 1556Right-handed alpha
Helix 53
AF8
A
1559 1561Right-handed 310
Helix 54
AF9
A
1586 1594Right-handed alpha
Helix 55
AG1
A
1594 1606Right-handed alpha
Helix 56
AG2
A
1618 1635Right-handed alpha
Helix 57
AG3
A
1645 1655Right-handed alpha
Helix 58
AG4
A
1658 1667Right-handed alpha
Helix 59
AG5
A
1677 1690Right-handed alpha
Helix 60
AG6
A
1732 1741Right-handed alpha
Helix 61
AG7
A
1762 1772Right-handed alpha
Helix 62
AG8
A
1779 1782Right-handed 310
Helix 63
AG9
A
1783 1794Right-handed alpha
Helix 64
AH1
A
1799 1808Right-handed alpha
Helix 65
AH2
A
1810 1815Right-handed alpha
Helix 66
AH3
A
1819 1824Right-handed alpha
Helix 67
AH4
A
1829 1851Right-handed alpha
Helix 68
AH5
A
1866 1875Right-handed alpha
Helix 69
AH6
A
1878 1885Right-handed alpha
Helix 70
AH7
A
1886 1889Right-handed 310
Helix 71
AH8
A
1894 1903Right-handed alpha
Helix 72
AH9
A
1905 1911Right-handed 310
Helix 73
AI1
A
1914 1916Right-handed 310
Helix 74
AI2
A
1917 1927Right-handed alpha
Helix 75
AI3
A
1939 1953Right-handed alpha
Helix 76
AI4
A
1958 1986Right-handed alpha
Helix 77
AI5
A
1990 2004Right-handed alpha
Helix 78
AI6
A
2010 2015Right-handed 310
Helix 79
AI7
A
2019 2029Right-handed alpha
Helix 80
AI8
A
2034 2039Right-handed alpha
Helix 81
AI9
A
2048 2057Right-handed alpha
Helix 82
AJ1
A
2059 2073Right-handed alpha
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There are 11 sheets in PDB entry 6QWS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
484 487first strand
Strand 2
A
491 496anti-parallel
Strand 3
A
733 740anti-parallel
Strand 4
A
915 922parallel
Strand 5
A
875 879parallel
Strand 6
A
771 774parallel
Strand 7
A
858 861parallel
Strand 8
A
834 835parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
614 616first strand
Strand 2
A
633 636parallel
Strand 3
A
585 589parallel
Strand 4
A
657 663parallel
Strand 5
A
695 700parallel
Strand 6
A
547 550parallel
Strand 7
A
721 723parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
882 885first strand
Strand 2
A
890 893anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1019 1021first strand
Strand 2
A
1028 1030anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1233 1241first strand
Strand 2
A
1246 1255anti-parallel
Strand 3
A
1302 1309anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1282 1291first strand
Strand 2
A
1267 1275anti-parallel
Strand 3
A
1317 1324anti-parallel
Strand 4
A
1331 1337anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1457 1459first strand
Strand 2
A
1476 1479parallel
Strand 3
A
1427 1430parallel
Strand 4
A
1502 1505parallel
Strand 5
A
1538 1543parallel
Strand 6
A
1397 1400parallel
Strand 7
A
1563 1565parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1575 1582first strand
Strand 2
A
1752 1759parallel
Strand 3
A
1712 1716parallel
Strand 4
A
1611 1615parallel
Strand 5
A
1695 1699parallel
Strand 6
A
1669 1672parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1719 1722first strand
Strand 2
A
1727 1730anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2080 2082first strand
Strand 2
A
2097 2100anti-parallel
Strand 3
A
2153 2156anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2143 2147first strand
Strand 2
A
2127 2132anti-parallel
Strand 3
A
2170 2174anti-parallel
Strand 4
A
2181 2182anti-parallel
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