Analysis of interatomic Contacts of Structural Units in PDB entry:
6QWV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QWV entry

There are 16 chains in PDB entry 6QWV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO 404LEU 546
B
ARG 392SER 548
C
VAL 401SER 548
D
ARG 403SER 548
E
PRO 402HIS 547
F
PRO 402MET 545
G
PRO 404SER 548
H
GLU 400MET 545
I
ARG 403HIS 547
J
PRO 402SER 548
K
VAL 401SER 548
L
PRO 404SER 548
M
PRO 402LEU 546
N
PRO 404LEU 546
O
PRO 402LEU 546
P
PRO 402MET 545
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are209 helices in PDB entry 6QWV. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
408 412Right-handed 310
Helix 2
AA2
A
413 424Right-handed alpha
Helix 3
AA3
A
426 428Right-handed 310
Helix 4
AA4
A
429 436Right-handed alpha
Helix 5
AA5
A
439 445Right-handed alpha
Helix 6
AA6
A
447 454Right-handed alpha
Helix 7
AA7
A
459 476Right-handed alpha
Helix 8
AA8
A
486 495Right-handed alpha
Helix 9
AA9
A
496 500Right-handed 310
Helix 10
AB1
A
501 508Right-handed alpha
Helix 11
AB2
A
511 516Right-handed alpha
Helix 12
AB3
A
519 526Right-handed alpha
Helix 13
AB4
A
531 544Right-handed alpha
Helix 14
AB5
B
394 398Right-handed 310
Helix 15
AB6
B
408 412Right-handed 310
Helix 16
AB7
B
413 424Right-handed alpha
Helix 17
AB8
B
426 428Right-handed 310
Helix 18
AB9
B
429 436Right-handed alpha
Helix 19
AC1
B
439 446Right-handed alpha
Helix 20
AC2
B
447 454Right-handed alpha
Helix 21
AC3
B
459 476Right-handed alpha
Helix 22
AC4
B
486 495Right-handed alpha
Helix 23
AC5
B
496 500Right-handed 310
Helix 24
AC6
B
501 508Right-handed alpha
Helix 25
AC7
B
511 516Right-handed alpha
Helix 26
AC8
B
519 526Right-handed alpha
Helix 27
AC9
B
531 544Right-handed alpha
Helix 28
AD1
C
408 412Right-handed 310
Helix 29
AD2
C
413 424Right-handed alpha
Helix 30
AD3
C
426 428Right-handed 310
Helix 31
AD4
C
429 436Right-handed alpha
Helix 32
AD5
C
439 445Right-handed alpha
Helix 33
AD6
C
447 454Right-handed alpha
Helix 34
AD7
C
459 476Right-handed alpha
Helix 35
AD8
C
486 495Right-handed alpha
Helix 36
AD9
C
496 500Right-handed 310
Helix 37
AE1
C
501 508Right-handed alpha
Helix 38
AE2
C
511 518Right-handed 310
Helix 39
AE3
C
519 526Right-handed alpha
Helix 40
AE4
C
531 544Right-handed alpha
Helix 41
AE5
D
408 412Right-handed 310
Helix 42
AE6
D
413 424Right-handed alpha
Helix 43
AE7
D
426 428Right-handed 310
Helix 44
AE8
D
429 436Right-handed alpha
Helix 45
AE9
D
439 445Right-handed alpha
Helix 46
AF1
D
447 454Right-handed alpha
Helix 47
AF2
D
459 477Right-handed alpha
Helix 48
AF3
D
486 495Right-handed alpha
Helix 49
AF4
D
496 500Right-handed 310
Helix 50
AF5
D
501 508Right-handed alpha
Helix 51
AF6
D
511 518Right-handed 310
Helix 52
AF7
D
519 526Right-handed alpha
Helix 53
AF8
D
531 544Right-handed alpha
Helix 54
AF9
E
408 412Right-handed 310
Helix 55
AG1
E
413 424Right-handed alpha
Helix 56
AG2
E
426 428Right-handed 310
Helix 57
AG3
E
429 436Right-handed alpha
Helix 58
AG4
E
439 445Right-handed alpha
Helix 59
AG5
E
447 454Right-handed alpha
Helix 60
AG6
E
459 476Right-handed alpha
Helix 61
AG7
E
486 495Right-handed alpha
Helix 62
AG8
E
496 500Right-handed 310
Helix 63
AG9
E
501 508Right-handed alpha
Helix 64
AH1
E
511 518Right-handed 310
Helix 65
AH2
E
519 526Right-handed alpha
Helix 66
AH3
E
531 544Right-handed alpha
Helix 67
AH4
F
408 412Right-handed 310
Helix 68
AH5
F
413 424Right-handed alpha
Helix 69
AH6
F
426 428Right-handed 310
Helix 70
AH7
F
429 436Right-handed alpha
Helix 71
AH8
F
439 445Right-handed alpha
Helix 72
AH9
F
447 454Right-handed alpha
Helix 73
AI1
F
459 477Right-handed alpha
Helix 74
AI2
F
486 495Right-handed alpha
Helix 75
AI3
F
496 500Right-handed 310
Helix 76
AI4
F
501 508Right-handed alpha
Helix 77
AI5
F
511 516Right-handed alpha
Helix 78
AI6
F
519 526Right-handed alpha
Helix 79
AI7
F
531 544Right-handed alpha
Helix 80
AI8
G
408 412Right-handed 310
Helix 81
AI9
G
413 424Right-handed alpha
Helix 82
AJ1
G
426 428Right-handed 310
Helix 83
AJ2
G
429 436Right-handed alpha
Helix 84
AJ3
G
439 445Right-handed alpha
Helix 85
AJ4
G
447 454Right-handed alpha
Helix 86
AJ5
G
459 476Right-handed alpha
Helix 87
AJ6
G
486 495Right-handed alpha
Helix 88
AJ7
G
496 500Right-handed 310
Helix 89
AJ8
G
501 508Right-handed alpha
Helix 90
AJ9
G
511 516Right-handed alpha
Helix 91
AK1
G
519 526Right-handed alpha
Helix 92
AK2
G
531 544Right-handed alpha
Helix 93
AK3
H
408 412Right-handed 310
Helix 94
AK4
H
413 424Right-handed alpha
Helix 95
AK5
H
426 428Right-handed 310
Helix 96
AK6
H
429 436Right-handed alpha
Helix 97
AK7
H
439 445Right-handed alpha
Helix 98
AK8
H
447 454Right-handed alpha
Helix 99
AK9
H
459 477Right-handed alpha
Helix 100
AL1
H
486 495Right-handed alpha
Helix 101
AL2
H
496 500Right-handed 310
Helix 102
AL3
H
501 508Right-handed alpha
Helix 103
AL4
H
511 516Right-handed alpha
Helix 104
AL5
H
519 526Right-handed alpha
Helix 105
AL6
H
531 545Right-handed alpha
Helix 106
AL7
I
408 412Right-handed 310
Helix 107
AL8
I
413 424Right-handed alpha
Helix 108
AL9
I
426 428Right-handed 310
Helix 109
AM1
I
429 436Right-handed alpha
Helix 110
AM2
I
439 446Right-handed alpha
Helix 111
AM3
I
447 454Right-handed alpha
Helix 112
AM4
I
459 476Right-handed alpha
Helix 113
AM5
I
486 495Right-handed alpha
Helix 114
AM6
I
496 500Right-handed 310
Helix 115
AM7
I
501 508Right-handed alpha
Helix 116
AM8
I
511 516Right-handed alpha
Helix 117
AM9
I
519 526Right-handed alpha
Helix 118
AN1
I
531 544Right-handed alpha
Helix 119
AN2
J
408 412Right-handed 310
Helix 120
AN3
J
413 424Right-handed alpha
Helix 121
AN4
J
426 428Right-handed 310
Helix 122
AN5
J
429 436Right-handed alpha
Helix 123
AN6
J
439 445Right-handed alpha
Helix 124
AN7
J
447 454Right-handed alpha
Helix 125
AN8
J
459 477Right-handed alpha
Helix 126
AN9
J
486 495Right-handed alpha
Helix 127
AO1
J
496 500Right-handed 310
Helix 128
AO2
J
501 508Right-handed alpha
Helix 129
AO3
J
511 518Right-handed 310
Helix 130
AO4
J
519 526Right-handed alpha
Helix 131
AO5
J
531 544Right-handed alpha
Helix 132
AO6
K
408 412Right-handed 310
Helix 133
AO7
K
413 424Right-handed alpha
Helix 134
AO8
K
426 428Right-handed 310
Helix 135
AO9
K
429 436Right-handed alpha
Helix 136
AP1
K
439 445Right-handed alpha
Helix 137
AP2
K
447 454Right-handed alpha
Helix 138
AP3
K
459 476Right-handed alpha
Helix 139
AP4
K
486 495Right-handed alpha
Helix 140
AP5
K
496 500Right-handed 310
Helix 141
AP6
K
501 508Right-handed alpha
Helix 142
AP7
K
511 518Right-handed 310
Helix 143
AP8
K
519 526Right-handed alpha
Helix 144
AP9
K
531 544Right-handed alpha
Helix 145
AQ1
L
408 412Right-handed 310
Helix 146
AQ2
L
413 424Right-handed alpha
Helix 147
AQ3
L
426 428Right-handed 310
Helix 148
AQ4
L
429 436Right-handed alpha
Helix 149
AQ5
L
439 445Right-handed alpha
Helix 150
AQ6
L
447 454Right-handed alpha
Helix 151
AQ7
L
459 476Right-handed alpha
Helix 152
AQ8
L
486 495Right-handed alpha
Helix 153
AQ9
L
496 500Right-handed 310
Helix 154
AR1
L
501 508Right-handed alpha
Helix 155
AR2
L
511 516Right-handed alpha
Helix 156
AR3
L
519 526Right-handed alpha
Helix 157
AR4
L
531 544Right-handed alpha
Helix 158
AR5
M
408 412Right-handed 310
Helix 159
AR6
M
413 424Right-handed alpha
Helix 160
AR7
M
426 428Right-handed 310
Helix 161
AR8
M
429 436Right-handed alpha
Helix 162
AR9
M
439 445Right-handed alpha
Helix 163
AS1
M
447 454Right-handed alpha
Helix 164
AS2
M
459 476Right-handed alpha
Helix 165
AS3
M
486 495Right-handed alpha
Helix 166
AS4
M
496 500Right-handed 310
Helix 167
AS5
M
501 508Right-handed alpha
Helix 168
AS6
M
511 516Right-handed alpha
Helix 169
AS7
M
519 526Right-handed alpha
Helix 170
AS8
M
531 544Right-handed alpha
Helix 171
AS9
N
408 412Right-handed 310
Helix 172
AT1
N
413 424Right-handed alpha
Helix 173
AT2
N
426 428Right-handed 310
Helix 174
AT3
N
429 436Right-handed alpha
Helix 175
AT4
N
439 445Right-handed alpha
Helix 176
AT5
N
447 454Right-handed alpha
Helix 177
AT6
N
459 476Right-handed alpha
Helix 178
AT7
N
486 495Right-handed alpha
Helix 179
AT8
N
496 500Right-handed 310
Helix 180
AT9
N
501 508Right-handed alpha
Helix 181
AU1
N
511 516Right-handed alpha
Helix 182
AU2
N
519 526Right-handed alpha
Helix 183
AU3
N
531 544Right-handed alpha
Helix 184
AU4
O
408 412Right-handed 310
Helix 185
AU5
O
413 424Right-handed alpha
Helix 186
AU6
O
426 428Right-handed 310
Helix 187
AU7
O
429 436Right-handed alpha
Helix 188
AU8
O
439 445Right-handed alpha
Helix 189
AU9
O
447 454Right-handed alpha
Helix 190
AV1
O
459 477Right-handed alpha
Helix 191
AV2
O
486 495Right-handed alpha
Helix 192
AV3
O
496 500Right-handed 310
Helix 193
AV4
O
501 508Right-handed alpha
Helix 194
AV5
O
511 516Right-handed alpha
Helix 195
AV6
O
519 526Right-handed alpha
Helix 196
AV7
O
531 544Right-handed alpha
Helix 197
AV8
P
408 412Right-handed 310
Helix 198
AV9
P
413 424Right-handed alpha
Helix 199
AW1
P
426 428Right-handed 310
Helix 200
AW2
P
429 436Right-handed alpha
Helix 201
AW3
P
439 445Right-handed alpha
Helix 202
AW4
P
447 454Right-handed alpha
Helix 203
AW5
P
459 476Right-handed alpha
Helix 204
AW6
P
486 495Right-handed alpha
Helix 205
AW7
P
496 500Right-handed 310
Helix 206
AW8
P
501 508Right-handed alpha
Helix 207
AW9
P
511 518Right-handed 310
Helix 208
AX1
P
519 526Right-handed alpha
Helix 209
AX2
P
531 544Right-handed alpha
Back to top of page
There are no sheets in PDB entry 6QWV

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il