Analysis of interatomic Contacts of Structural Units in PDB entry:
6QXF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QXF entry

There are 22 chains in PDB entry 6QXF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1ASN 218
B
MET 1ASN 219
C
MET 1ASN 218
D
MET 1ASN 219
E
MET 1ASN 218
F
MET 1ASN 219
G
MET 1ASN 218
H
MET 1ASN 219
I
GLY 3ILE 289
J
GLY 3ILE 289
K
GLU 100TYR 110
L
GLY 3ILE 289
M
GLY 3ILE 289
N
GLU 100TYR 110
O
GLY 3ILE 289
P
GLY 3ILE 289
Q
GLU 100TYR 110
R
GLY 3ILE 289
S
GLY 3ILE 289
T
GLU 100TYR 110
X
T 1 T 25
Y
A 1 A 25
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are137 helices in PDB entry 6QXF. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
24 37Right-handed alpha
Helix 2
AA2
A
72 90Right-handed alpha
Helix 3
AA3
A
90 115Right-handed alpha
Helix 4
AA4
A
125 134Right-handed alpha
Helix 5
AA5
A
143 158Right-handed alpha
Helix 6
AA6
A
174 189Right-handed alpha
Helix 7
AA7
B
24 37Right-handed alpha
Helix 8
AA8
B
72 90Right-handed alpha
Helix 9
AA9
B
90 115Right-handed alpha
Helix 10
AB1
B
125 134Right-handed alpha
Helix 11
AB2
B
143 155Right-handed alpha
Helix 12
AB3
B
169 172Right-handed 310
Helix 13
AB4
B
174 189Right-handed alpha
Helix 14
AB5
C
24 37Right-handed alpha
Helix 15
AB6
C
72 90Right-handed alpha
Helix 16
AB7
C
90 115Right-handed alpha
Helix 17
AB8
C
125 134Right-handed alpha
Helix 18
AB9
C
143 158Right-handed alpha
Helix 19
AC1
C
174 189Right-handed alpha
Helix 20
AC2
D
24 37Right-handed alpha
Helix 21
AC3
D
72 90Right-handed alpha
Helix 22
AC4
D
90 115Right-handed alpha
Helix 23
AC5
D
125 134Right-handed alpha
Helix 24
AC6
D
143 155Right-handed alpha
Helix 25
AC7
D
169 172Right-handed 310
Helix 26
AC8
D
174 189Right-handed alpha
Helix 27
AC9
E
24 37Right-handed alpha
Helix 28
AD1
E
72 90Right-handed alpha
Helix 29
AD2
E
90 115Right-handed alpha
Helix 30
AD3
E
125 134Right-handed alpha
Helix 31
AD4
E
143 158Right-handed alpha
Helix 32
AD5
E
174 189Right-handed alpha
Helix 33
AD6
F
24 37Right-handed alpha
Helix 34
AD7
F
72 90Right-handed alpha
Helix 35
AD8
F
90 115Right-handed alpha
Helix 36
AD9
F
125 134Right-handed alpha
Helix 37
AE1
F
143 155Right-handed alpha
Helix 38
AE2
F
169 172Right-handed 310
Helix 39
AE3
F
174 189Right-handed alpha
Helix 40
AE4
G
24 37Right-handed alpha
Helix 41
AE5
G
72 90Right-handed alpha
Helix 42
AE6
G
90 115Right-handed alpha
Helix 43
AE7
G
125 134Right-handed alpha
Helix 44
AE8
G
143 158Right-handed alpha
Helix 45
AE9
G
174 189Right-handed alpha
Helix 46
AF1
H
24 37Right-handed alpha
Helix 47
AF2
H
72 90Right-handed alpha
Helix 48
AF3
H
90 115Right-handed alpha
Helix 49
AF4
H
125 134Right-handed alpha
Helix 50
AF5
H
143 155Right-handed alpha
Helix 51
AF6
H
174 189Right-handed alpha
Helix 52
AF7
I
52 62Right-handed alpha
Helix 53
AF8
I
85 96Right-handed alpha
Helix 54
AF9
I
98 124Right-handed alpha
Helix 55
AG1
I
126 140Right-handed alpha
Helix 56
AG2
I
147 162Right-handed alpha
Helix 57
AG3
I
171 196Right-handed alpha
Helix 58
AG4
I
212 219Right-handed alpha
Helix 59
AG5
I
220 222Right-handed 310
Helix 60
AG6
I
223 233Right-handed alpha
Helix 61
AG7
I
237 247Right-handed alpha
Helix 62
AG8
I
262 279Right-handed alpha
Helix 63
AG9
J
52 61Right-handed alpha
Helix 64
AH1
J
85 96Right-handed alpha
Helix 65
AH2
J
98 124Right-handed alpha
Helix 66
AH3
J
126 140Right-handed alpha
Helix 67
AH4
J
147 162Right-handed alpha
Helix 68
AH5
J
171 196Right-handed alpha
Helix 69
AH6
J
212 220Right-handed alpha
Helix 70
AH7
J
222 234Right-handed alpha
Helix 71
AH8
J
237 251Right-handed alpha
Helix 72
AH9
J
262 279Right-handed alpha
Helix 73
AI1
L
52 62Right-handed alpha
Helix 74
AI2
L
85 96Right-handed alpha
Helix 75
AI3
L
98 124Right-handed alpha
Helix 76
AI4
L
126 140Right-handed alpha
Helix 77
AI5
L
147 162Right-handed alpha
Helix 78
AI6
L
171 196Right-handed alpha
Helix 79
AI7
L
212 219Right-handed alpha
Helix 80
AI8
L
220 222Right-handed 310
Helix 81
AI9
L
223 233Right-handed alpha
Helix 82
AJ1
L
237 246Right-handed alpha
Helix 83
AJ2
L
247 249Right-handed 310
Helix 84
AJ3
L
262 279Right-handed alpha
Helix 85
AJ4
M
52 61Right-handed alpha
Helix 86
AJ5
M
85 96Right-handed alpha
Helix 87
AJ6
M
98 124Right-handed alpha
Helix 88
AJ7
M
126 140Right-handed alpha
Helix 89
AJ8
M
147 162Right-handed alpha
Helix 90
AJ9
M
171 196Right-handed alpha
Helix 91
AK1
M
212 220Right-handed alpha
Helix 92
AK2
M
222 234Right-handed alpha
Helix 93
AK3
M
237 251Right-handed alpha
Helix 94
AK4
M
262 279Right-handed alpha
Helix 95
AK5
O
52 62Right-handed alpha
Helix 96
AK6
O
85 96Right-handed alpha
Helix 97
AK7
O
98 124Right-handed alpha
Helix 98
AK8
O
126 140Right-handed alpha
Helix 99
AK9
O
147 162Right-handed alpha
Helix 100
AL1
O
171 196Right-handed alpha
Helix 101
AL2
O
212 219Right-handed alpha
Helix 102
AL3
O
220 222Right-handed 310
Helix 103
AL4
O
223 233Right-handed alpha
Helix 104
AL5
O
237 246Right-handed alpha
Helix 105
AL6
O
247 249Right-handed 310
Helix 106
AL7
O
262 279Right-handed alpha
Helix 107
AL8
P
52 61Right-handed alpha
Helix 108
AL9
P
85 96Right-handed alpha
Helix 109
AM1
P
98 124Right-handed alpha
Helix 110
AM2
P
126 140Right-handed alpha
Helix 111
AM3
P
147 162Right-handed alpha
Helix 112
AM4
P
171 196Right-handed alpha
Helix 113
AM5
P
212 220Right-handed alpha
Helix 114
AM6
P
222 234Right-handed alpha
Helix 115
AM7
P
237 251Right-handed alpha
Helix 116
AM8
P
262 279Right-handed alpha
Helix 117
AM9
R
52 62Right-handed alpha
Helix 118
AN1
R
85 96Right-handed alpha
Helix 119
AN2
R
98 124Right-handed alpha
Helix 120
AN3
R
126 140Right-handed alpha
Helix 121
AN4
R
147 162Right-handed alpha
Helix 122
AN5
R
171 196Right-handed alpha
Helix 123
AN6
R
212 219Right-handed alpha
Helix 124
AN7
R
220 222Right-handed 310
Helix 125
AN8
R
223 233Right-handed alpha
Helix 126
AN9
R
237 247Right-handed alpha
Helix 127
AO1
R
262 279Right-handed alpha
Helix 128
AO2
S
52 61Right-handed alpha
Helix 129
AO3
S
85 96Right-handed alpha
Helix 130
AO4
S
98 124Right-handed alpha
Helix 131
AO5
S
126 140Right-handed alpha
Helix 132
AO6
S
147 162Right-handed alpha
Helix 133
AO7
S
171 196Right-handed alpha
Helix 134
AO8
S
212 220Right-handed alpha
Helix 135
AO9
S
222 234Right-handed alpha
Helix 136
AP1
S
237 251Right-handed alpha
Helix 137
AP2
S
262 279Right-handed alpha
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There are 40 sheets in PDB entry 6QXF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
12 13first strand
Strand 2
A
2 4anti-parallel
Strand 3
A
45 47anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
59 62first strand
Strand 2
A
163 167parallel
Strand 3
A
192 196parallel
Strand 4
A
17 22parallel
Strand 5
A
205 208parallel
Strand 6
A
214 217anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
136 137first strand
Strand 2
D
119 120anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
12 13first strand
Strand 2
B
2 4anti-parallel
Strand 3
B
45 47anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
59 62first strand
Strand 2
B
163 167parallel
Strand 3
B
192 196parallel
Strand 4
B
17 22parallel
Strand 5
B
205 208parallel
Strand 6
B
214 217anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
119 120first strand
Strand 2
C
136 137anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
12 13first strand
Strand 2
C
2 4anti-parallel
Strand 3
C
45 47anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
59 62first strand
Strand 2
C
163 167parallel
Strand 3
C
192 196parallel
Strand 4
C
17 22parallel
Strand 5
C
205 208parallel
Strand 6
C
214 217anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
12 13first strand
Strand 2
D
2 4anti-parallel
Strand 3
D
45 47anti-parallel
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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
59 62first strand
Strand 2
D
163 167parallel
Strand 3
D
192 196parallel
Strand 4
D
17 22parallel
Strand 5
D
205 208parallel
Strand 6
D
214 217anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
12 13first strand
Strand 2
E
2 4anti-parallel
Strand 3
E
45 47anti-parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
59 62first strand
Strand 2
E
163 167parallel
Strand 3
E
192 196parallel
Strand 4
E
17 22parallel
Strand 5
E
205 208parallel
Strand 6
E
214 217anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
136 137first strand
Strand 2
H
119 120anti-parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
12 13first strand
Strand 2
F
2 4anti-parallel
Strand 3
F
45 47anti-parallel
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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
59 62first strand
Strand 2
F
163 167parallel
Strand 3
F
192 196parallel
Strand 4
F
17 22parallel
Strand 5
F
205 208parallel
Strand 6
F
214 217anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
119 120first strand
Strand 2
G
136 137anti-parallel
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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
12 13first strand
Strand 2
G
2 4anti-parallel
Strand 3
G
45 47anti-parallel
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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
59 62first strand
Strand 2
G
163 167parallel
Strand 3
G
192 196parallel
Strand 4
G
17 22parallel
Strand 5
G
205 208parallel
Strand 6
G
214 217anti-parallel
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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
12 13first strand
Strand 2
H
2 4anti-parallel
Strand 3
H
45 47anti-parallel
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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
59 62first strand
Strand 2
H
163 167parallel
Strand 3
H
192 196parallel
Strand 4
H
17 22parallel
Strand 5
H
205 208parallel
Strand 6
H
214 217anti-parallel
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There are 9 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
5 9first strand
Strand 2
I
38 43parallel
Strand 3
I
64 68parallel
Strand 4
I
74 80anti-parallel
Strand 5
J
74 80anti-parallel
Strand 6
J
64 68anti-parallel
Strand 7
J
38 43parallel
Strand 8
J
5 9parallel
Strand 9
K
103 106parallel
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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
14 18first strand
Strand 2
I
21 25anti-parallel
Strand 3
I
30 34anti-parallel
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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
49 51first strand
Strand 2
J
48 51anti-parallel
Strand 3
J
13 18parallel
Strand 4
J
21 25anti-parallel
Strand 5
J
30 34anti-parallel
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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
252 254first strand
Strand 2
I
259 261anti-parallel
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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
252 254first strand
Strand 2
J
259 261anti-parallel
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There are 9 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
5 9first strand
Strand 2
L
38 43parallel
Strand 3
L
64 68parallel
Strand 4
L
74 80anti-parallel
Strand 5
M
74 80anti-parallel
Strand 6
M
64 68anti-parallel
Strand 7
M
38 43parallel
Strand 8
M
5 9parallel
Strand 9
N
103 106parallel
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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
14 18first strand
Strand 2
L
21 25anti-parallel
Strand 3
L
30 34anti-parallel
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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
49 51first strand
Strand 2
M
48 51anti-parallel
Strand 3
M
13 18parallel
Strand 4
M
21 25anti-parallel
Strand 5
M
30 34anti-parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
252 254first strand
Strand 2
L
259 261anti-parallel
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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
252 254first strand
Strand 2
M
259 261anti-parallel
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There are 9 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
5 9first strand
Strand 2
O
38 43parallel
Strand 3
O
64 68parallel
Strand 4
O
74 80anti-parallel
Strand 5
P
74 80anti-parallel
Strand 6
P
64 68anti-parallel
Strand 7
P
38 43parallel
Strand 8
P
5 9parallel
Strand 9
Q
103 106parallel
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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
14 18first strand
Strand 2
O
21 25anti-parallel
Strand 3
O
30 34anti-parallel
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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
49 51first strand
Strand 2
P
48 51anti-parallel
Strand 3
P
13 18parallel
Strand 4
P
21 25anti-parallel
Strand 5
P
30 34anti-parallel
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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
252 254first strand
Strand 2
O
259 261anti-parallel
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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
P
252 254first strand
Strand 2
P
259 261anti-parallel
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There are 9 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
R
5 9first strand
Strand 2
R
38 43parallel
Strand 3
R
64 68parallel
Strand 4
R
74 80anti-parallel
Strand 5
S
74 80anti-parallel
Strand 6
S
64 68anti-parallel
Strand 7
S
38 43parallel
Strand 8
S
5 9parallel
Strand 9
T
103 106parallel
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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
R
14 18first strand
Strand 2
R
21 25anti-parallel
Strand 3
R
30 34anti-parallel
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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
R
49 51first strand
Strand 2
S
48 51anti-parallel
Strand 3
S
13 18parallel
Strand 4
S
21 25anti-parallel
Strand 5
S
30 34anti-parallel
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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
R
252 254first strand
Strand 2
R
259 261anti-parallel
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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
S
252 254first strand
Strand 2
S
259 261anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il