Analysis of interatomic Contacts of Structural Units in PDB entry:
6QZL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QZL entry

There are 5 chains in PDB entry 6QZL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 204GLU 325
B
 SER 204GLU 325
C
 ARG 205GLU 325
D
 SER 204GLU 325
E
 SER 204GLU 325
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 6QZL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
242 250Right-handed alpha
Helix 2
AA2
A
276 287Right-handed alpha
Helix 3
AA3
B
242 250Right-handed alpha
Helix 4
AA4
B
276 287Right-handed alpha
Helix 5
AA5
C
242 250Right-handed alpha
Helix 6
AA6
C
276 287Right-handed alpha
Helix 7
AA7
D
242 250Right-handed alpha
Helix 8
AA8
D
276 287Right-handed alpha
Helix 9
AA9
E
242 250Right-handed alpha
Helix 10
AB1
E
276 287Right-handed alpha
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There are 5 sheets in PDB entry 6QZL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
253 254first strand
Strand 2
A
266 272anti-parallel
Strand 3
A
236 241anti-parallel
Strand 4
A
208 219anti-parallel
Strand 5
A
313 324anti-parallel
Strand 6
A
290 301anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
253 254first strand
Strand 2
B
266 272anti-parallel
Strand 3
B
236 241anti-parallel
Strand 4
B
208 217anti-parallel
Strand 5
B
315 324anti-parallel
Strand 6
B
290 298anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
253 254first strand
Strand 2
C
266 272anti-parallel
Strand 3
C
236 241anti-parallel
Strand 4
C
208 218anti-parallel
Strand 5
C
314 324anti-parallel
Strand 6
C
290 299anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
253 254first strand
Strand 2
D
266 272anti-parallel
Strand 3
D
236 241anti-parallel
Strand 4
D
208 216anti-parallel
Strand 5
D
316 324anti-parallel
Strand 6
D
290 297anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
253 254first strand
Strand 2
E
266 272anti-parallel
Strand 3
E
236 241anti-parallel
Strand 4
E
208 216anti-parallel
Strand 5
E
316 324anti-parallel
Strand 6
E
290 298anti-parallel
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