Analysis of interatomic Contacts of Structural Units in PDB entry:
6QZQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6QZQ entry

There are 3 chains in PDB entry 6QZQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ALA 454
B	MET 1	ALA 454
C	MET 1	LEU 339

There are124 helices in PDB entry 6QZQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	30	40	Right-handed alpha
Helix 2	AA2	A	58	74	Right-handed alpha
Helix 3	AA3	A	79	85	Right-handed alpha
Helix 4	AA4	A	129	143	Right-handed alpha
Helix 5	AA5	A	157	170	Right-handed alpha
Helix 6	AA6	A	195	214	Right-handed alpha
Helix 7	AA7	A	216	220	Right-handed 310
Helix 8	AA8	A	223	229	Right-handed alpha
Helix 9	AA9	A	238	248	Right-handed alpha
Helix 10	AB1	A	251	263	Right-handed alpha
Helix 11	AB2	A	265	272	Right-handed alpha
Helix 12	AB3	A	272	296	Right-handed alpha
Helix 13	AB4	A	297	300	Right-handed 310
Helix 14	AB5	A	310	318	Right-handed alpha
Helix 15	AB6	A	319	324	Right-handed 310
Helix 16	AB7	A	328	343	Right-handed alpha
Helix 17	AB8	A	345	365	Right-handed alpha
Helix 18	AB9	A	374	392	Right-handed alpha
Helix 19	AC1	A	394	404	Right-handed alpha
Helix 20	AC2	A	430	439	Right-handed alpha
Helix 21	AC3	A	439	453	Right-handed alpha
Helix 22	AC4	B	30	40	Right-handed alpha
Helix 23	AC5	B	58	74	Right-handed alpha
Helix 24	AC6	B	79	85	Right-handed alpha
Helix 25	AC7	B	129	143	Right-handed alpha
Helix 26	AC8	B	157	170	Right-handed alpha
Helix 27	AC9	B	195	215	Right-handed alpha
Helix 28	AD1	B	216	220	Right-handed 310
Helix 29	AD2	B	223	230	Right-handed alpha
Helix 30	AD3	B	238	248	Right-handed alpha
Helix 31	AD4	B	251	263	Right-handed alpha
Helix 32	AD5	B	265	272	Right-handed alpha
Helix 33	AD6	B	272	296	Right-handed alpha
Helix 34	AD7	B	297	304	Right-handed 310
Helix 35	AD8	B	310	318	Right-handed alpha
Helix 36	AD9	B	319	324	Right-handed 310
Helix 37	AE1	B	328	343	Right-handed alpha
Helix 38	AE2	B	345	365	Right-handed alpha
Helix 39	AE3	B	374	392	Right-handed alpha
Helix 40	AE4	B	393	404	Right-handed alpha
Helix 41	AE5	B	428	439	Right-handed alpha
Helix 42	AE6	B	439	452	Right-handed alpha
Helix 43	AE7	C	30	40	Right-handed alpha
Helix 44	AE8	C	58	74	Right-handed alpha
Helix 45	AE9	C	79	85	Right-handed alpha
Helix 46	AF1	C	129	143	Right-handed alpha
Helix 47	AF2	C	157	170	Right-handed alpha
Helix 48	AF3	C	195	214	Right-handed alpha
Helix 49	AF4	C	216	220	Right-handed 310
Helix 50	AF5	C	223	229	Right-handed alpha
Helix 51	AF6	C	238	248	Right-handed alpha
Helix 52	AF7	C	251	264	Right-handed alpha
Helix 53	AF8	C	265	272	Right-handed alpha
Helix 54	AF9	C	272	294	Right-handed alpha
Helix 55	AG1	C	296	304	Right-handed 310
Helix 56	AG2	C	310	318	Right-handed alpha
Helix 57	AG3	C	319	324	Right-handed 310
Helix 58	AG4	C	328	343	Right-handed alpha
Helix 59	AG5	C	345	365	Right-handed alpha
Helix 60	AG6	C	374	392	Right-handed alpha
Helix 61	AG7	C	392	404	Right-handed alpha
Helix 62	AG8	C	428	439	Right-handed alpha
Helix 63	AG9	C	439	453	Right-handed alpha
Helix 64	AH1	D	30	40	Right-handed alpha
Helix 65	AH2	D	58	74	Right-handed alpha
Helix 66	AH3	D	79	85	Right-handed alpha
Helix 67	AH4	D	129	143	Right-handed alpha
Helix 68	AH5	D	157	170	Right-handed alpha
Helix 69	AH6	D	195	215	Right-handed alpha
Helix 70	AH7	D	216	220	Right-handed 310
Helix 71	AH8	D	223	229	Right-handed alpha
Helix 72	AH9	D	238	248	Right-handed alpha
Helix 73	AI1	D	251	264	Right-handed alpha
Helix 74	AI2	D	265	272	Right-handed alpha
Helix 75	AI3	D	272	294	Right-handed alpha
Helix 76	AI4	D	310	318	Right-handed alpha
Helix 77	AI5	D	319	324	Right-handed 310
Helix 78	AI6	D	328	343	Right-handed alpha
Helix 79	AI7	D	345	365	Right-handed alpha
Helix 80	AI8	D	374	392	Right-handed alpha
Helix 81	AI9	D	392	404	Right-handed alpha
Helix 82	AJ1	D	429	439	Right-handed alpha
Helix 83	AJ2	D	439	453	Right-handed alpha
Helix 84	AJ3	E	30	40	Right-handed alpha
Helix 85	AJ4	E	58	74	Right-handed alpha
Helix 86	AJ5	E	79	85	Right-handed alpha
Helix 87	AJ6	E	129	143	Right-handed alpha
Helix 88	AJ7	E	157	170	Right-handed alpha
Helix 89	AJ8	E	195	214	Right-handed alpha
Helix 90	AJ9	E	216	220	Right-handed 310
Helix 91	AK1	E	223	229	Right-handed alpha
Helix 92	AK2	E	238	248	Right-handed alpha
Helix 93	AK3	E	251	263	Right-handed alpha
Helix 94	AK4	E	265	272	Right-handed alpha
Helix 95	AK5	E	272	296	Right-handed alpha
Helix 96	AK6	E	310	318	Right-handed alpha
Helix 97	AK7	E	319	324	Right-handed 310
Helix 98	AK8	E	328	343	Right-handed alpha
Helix 99	AK9	E	345	365	Right-handed alpha
Helix 100	AL1	E	374	392	Right-handed alpha
Helix 101	AL2	E	392	404	Right-handed alpha
Helix 102	AL3	E	428	439	Right-handed alpha
Helix 103	AL4	E	439	453	Right-handed alpha
Helix 104	AL5	F	30	40	Right-handed alpha
Helix 105	AL6	F	58	74	Right-handed alpha
Helix 106	AL7	F	79	85	Right-handed alpha
Helix 107	AL8	F	129	143	Right-handed alpha
Helix 108	AL9	F	157	170	Right-handed alpha
Helix 109	AM1	F	195	214	Right-handed alpha
Helix 110	AM2	F	216	220	Right-handed 310
Helix 111	AM3	F	223	229	Right-handed alpha
Helix 112	AM4	F	238	248	Right-handed alpha
Helix 113	AM5	F	251	263	Right-handed alpha
Helix 114	AM6	F	265	272	Right-handed alpha
Helix 115	AM7	F	272	294	Right-handed alpha
Helix 116	AM8	F	295	304	Right-handed 310
Helix 117	AM9	F	310	318	Right-handed alpha
Helix 118	AN1	F	319	324	Right-handed 310
Helix 119	AN2	F	328	343	Right-handed alpha
Helix 120	AN3	F	345	365	Right-handed alpha
Helix 121	AN4	F	374	392	Right-handed alpha
Helix 122	AN5	F	393	404	Right-handed alpha
Helix 123	AN6	F	430	439	Right-handed alpha
Helix 124	AN7	F	439	453	Right-handed alpha

There are 24 sheets in PDB entry 6QZQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	6	first strand
Strand 2	A	151	152	parallel
Strand 3	A	175	177	parallel
Strand 4	A	193	194	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	24	28	first strand
Strand 2	A	17	21	anti-parallel
Strand 3	A	190	191	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	44	45	first strand
Strand 2	A	86	87	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	109	111	first strand
Strand 2	A	116	118	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	6	first strand
Strand 2	B	151	152	parallel
Strand 3	B	175	177	parallel
Strand 4	B	193	194	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	24	28	first strand
Strand 2	B	17	21	anti-parallel
Strand 3	B	190	191	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	44	45	first strand
Strand 2	B	86	87	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	109	111	first strand
Strand 2	B	116	118	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	6	first strand
Strand 2	C	151	152	parallel
Strand 3	C	175	177	parallel
Strand 4	C	193	194	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	24	28	first strand
Strand 2	C	17	21	anti-parallel
Strand 3	C	190	191	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	44	45	first strand
Strand 2	C	86	87	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	109	111	first strand
Strand 2	C	116	118	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	368	369	first strand
Strand 2	D	414	415	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	5	6	first strand
Strand 2	D	151	152	parallel
Strand 3	D	175	176	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	24	28	first strand
Strand 2	D	17	21	anti-parallel
Strand 3	D	190	191	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	109	111	first strand
Strand 2	D	116	118	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	5	6	first strand
Strand 2	E	151	152	parallel
Strand 3	E	175	177	parallel
Strand 4	E	193	194	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	24	28	first strand
Strand 2	E	17	21	anti-parallel
Strand 3	E	190	191	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	44	45	first strand
Strand 2	E	86	87	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	109	111	first strand
Strand 2	E	116	118	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	5	6	first strand
Strand 2	F	151	152	parallel
Strand 3	F	175	177	parallel
Strand 4	F	193	194	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	24	28	first strand
Strand 2	F	17	21	anti-parallel
Strand 3	F	190	191	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	44	45	first strand
Strand 2	F	86	87	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	109	111	first strand
Strand 2	F	116	118	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6QZQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6QZQ