Analysis of interatomic Contacts of Structural Units in PDB entry:
6QZT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QZT entry

There are 3 chains in PDB entry 6QZT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 454
B
 MET 1ALA 454
C
 MET 1ALA 454
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 62 helices in PDB entry 6QZT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 40Right-handed alpha
Helix 2
AA2
A
58 72Right-handed alpha
Helix 3
AA3
A
80 85Right-handed alpha
Helix 4
AA4
A
129 144Right-handed alpha
Helix 5
AA5
A
157 170Right-handed alpha
Helix 6
AA6
A
196 214Right-handed alpha
Helix 7
AA7
A
216 220Right-handed 310
Helix 8
AA8
A
223 229Right-handed alpha
Helix 9
AA9
A
236 248Right-handed alpha
Helix 10
AB1
A
250 264Right-handed alpha
Helix 11
AB2
A
265 296Right-handed alpha
Helix 12
AB3
A
302 306Right-handed 310
Helix 13
AB4
A
310 318Right-handed alpha
Helix 14
AB5
A
319 324Right-handed 310
Helix 15
AB6
A
328 343Right-handed alpha
Helix 16
AB7
A
345 365Right-handed alpha
Helix 17
AB8
A
374 391Right-handed alpha
Helix 18
AB9
A
392 405Right-handed alpha
Helix 19
AC1
A
428 438Right-handed alpha
Helix 20
AC2
A
438 451Right-handed alpha
Helix 21
AC3
B
30 40Right-handed alpha
Helix 22
AC4
B
58 60Right-handed 310
Helix 23
AC5
B
61 74Right-handed alpha
Helix 24
AC6
B
129 144Right-handed alpha
Helix 25
AC7
B
157 170Right-handed alpha
Helix 26
AC8
B
195 214Right-handed alpha
Helix 27
AC9
B
216 220Right-handed 310
Helix 28
AD1
B
223 229Right-handed alpha
Helix 29
AD2
B
236 248Right-handed alpha
Helix 30
AD3
B
250 264Right-handed alpha
Helix 31
AD4
B
265 272Right-handed alpha
Helix 32
AD5
B
272 296Right-handed alpha
Helix 33
AD6
B
302 306Right-handed 310
Helix 34
AD7
B
310 318Right-handed alpha
Helix 35
AD8
B
319 324Right-handed 310
Helix 36
AD9
B
328 343Right-handed alpha
Helix 37
AE1
B
345 365Right-handed alpha
Helix 38
AE2
B
374 392Right-handed alpha
Helix 39
AE3
B
392 405Right-handed alpha
Helix 40
AE4
B
428 438Right-handed alpha
Helix 41
AE5
B
439 453Right-handed alpha
Helix 42
AE6
C
10 14Right-handed 310
Helix 43
AE7
C
30 40Right-handed alpha
Helix 44
AE8
C
58 74Right-handed alpha
Helix 45
AE9
C
79 84Right-handed alpha
Helix 46
AF1
C
129 144Right-handed alpha
Helix 47
AF2
C
157 170Right-handed alpha
Helix 48
AF3
C
195 214Right-handed alpha
Helix 49
AF4
C
216 220Right-handed 310
Helix 50
AF5
C
223 229Right-handed alpha
Helix 51
AF6
C
236 248Right-handed alpha
Helix 52
AF7
C
250 264Right-handed alpha
Helix 53
AF8
C
265 296Right-handed alpha
Helix 54
AF9
C
301 306Right-handed 310
Helix 55
AG1
C
310 318Right-handed alpha
Helix 56
AG2
C
319 324Right-handed 310
Helix 57
AG3
C
328 343Right-handed alpha
Helix 58
AG4
C
345 365Right-handed alpha
Helix 59
AG5
C
374 391Right-handed alpha
Helix 60
AG6
C
392 405Right-handed alpha
Helix 61
AG7
C
428 438Right-handed alpha
Helix 62
AG8
C
438 451Right-handed alpha
Back to top of page

There are 14 sheets in PDB entry 6QZT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 91first strand
Strand 2
A
43 49parallel
Strand 3
A
2 7parallel
Strand 4
A
148 152parallel
Strand 5
A
173 177parallel
Strand 6
A
193 194anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 28first strand
Strand 2
A
17 21anti-parallel
Strand 3
A
189 191parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
367 369first strand
Strand 2
B
414 416anti-parallel
Strand 3
B
421 422anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
421 422first strand
Strand 2
A
414 415anti-parallel
Strand 3
B
368 369anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 45first strand
Strand 2
B
2 6parallel
Strand 3
B
148 152parallel
Strand 4
B
173 177parallel
Strand 5
B
193 194anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 26first strand
Strand 2
B
18 21anti-parallel
Strand 3
B
189 191parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 49first strand
Strand 2
B
90 91parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 55first strand
Strand 2
B
100 102parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
86 91first strand
Strand 2
C
43 49parallel
Strand 3
C
2 7parallel
Strand 4
C
148 152parallel
Strand 5
C
173 177parallel
Strand 6
C
193 194anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
24 28first strand
Strand 2
C
17 21anti-parallel
Strand 3
C
189 191parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
53 54first strand
Strand 2
C
95 103parallel
Strand 3
C
106 107anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
53 54first strand
Strand 2
C
95 103parallel
Strand 3
C
121 126anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
109 110first strand
Strand 2
C
118 119anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
414 415first strand
Strand 2
C
421 422anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il