Analysis of interatomic Contacts of Structural Units in PDB entry:
6QZZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QZZ entry

There are 5 chains in PDB entry 6QZZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 7TRP 400
A
 ILE 402GLY 411
B
 THR 7TRP 400
B
 ILE 402ILE 402
B
 GLY 405SER 412
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 6QZZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 36Right-handed alpha
Helix 2
AA2
A
45 56Right-handed alpha
Helix 3
AA3
A
63 66Right-handed 310
Helix 4
AA4
A
71 89Right-handed alpha
Helix 5
AA5
A
105 118Right-handed alpha
Helix 6
AA6
A
129 139Right-handed alpha
Helix 7
AA7
A
152 158Right-handed alpha
Helix 8
AA8
A
172 176Right-handed 310
Helix 9
AA9
A
190 203Right-handed alpha
Helix 10
AB1
A
229 232Right-handed 310
Helix 11
AB2
A
233 238Right-handed alpha
Helix 12
AB3
A
257 264Right-handed alpha
Helix 13
AB4
A
268 272Right-handed 310
Helix 14
AB5
A
296 305Right-handed alpha
Helix 15
AB6
A
306 309Right-handed 310
Helix 16
AB7
A
321 334Right-handed alpha
Helix 17
AB8
A
334 344Right-handed alpha
Helix 18
AB9
A
344 352Right-handed alpha
Helix 19
AC1
A
356 366Right-handed alpha
Helix 20
AC2
A
367 376Right-handed alpha
Helix 21
AC3
A
404 411Right-handed alpha
Helix 22
AC4
B
26 36Right-handed alpha
Helix 23
AC5
B
45 56Right-handed alpha
Helix 24
AC6
B
63 66Right-handed 310
Helix 25
AC7
B
71 89Right-handed alpha
Helix 26
AC8
B
105 118Right-handed alpha
Helix 27
AC9
B
129 139Right-handed alpha
Helix 28
AD1
B
152 158Right-handed alpha
Helix 29
AD2
B
172 176Right-handed 310
Helix 30
AD3
B
190 203Right-handed alpha
Helix 31
AD4
B
229 232Right-handed 310
Helix 32
AD5
B
233 238Right-handed alpha
Helix 33
AD6
B
257 264Right-handed alpha
Helix 34
AD7
B
268 272Right-handed 310
Helix 35
AD8
B
296 305Right-handed alpha
Helix 36
AD9
B
306 309Right-handed 310
Helix 37
AE1
B
321 334Right-handed alpha
Helix 38
AE2
B
334 344Right-handed alpha
Helix 39
AE3
B
344 352Right-handed alpha
Helix 40
AE4
B
356 366Right-handed alpha
Helix 41
AE5
B
367 376Right-handed alpha
Helix 42
AE6
B
379 384Right-handed alpha
Helix 43
AE7
B
407 412Right-handed alpha
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There are 3 sheets in PDB entry 6QZZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 61first strand
Strand 2
A
38 42parallel
Strand 3
A
92 97parallel
Strand 4
A
11 16parallel
Strand 5
A
121 124parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 227first strand
Strand 2
A
207 212anti-parallel
Strand 3
A
245 248anti-parallel
Strand 4
A
167 171anti-parallel
Strand 5
A
147 151parallel
Strand 6
B
147 151anti-parallel
Strand 7
B
167 171parallel
Strand 8
B
245 248anti-parallel
Strand 9
B
207 212anti-parallel
Strand 10
B
222 227anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 61first strand
Strand 2
B
38 42parallel
Strand 3
B
92 97parallel
Strand 4
B
11 16parallel
Strand 5
B
121 124parallel
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