Analysis of interatomic Contacts of Structural Units in PDB entry:
6R0X

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6R0X entry

There are 6 chains in PDB entry 6R0X (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 20	ARG 238
B	ASP 21	CYS 234
C	VAL 21	CYS 240
D	ASP 21	CYS 234
E	GLY 20	CYS 129
F	PRO 19	THR 127

There are 9 helices in PDB entry 6R0X. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	47	51	Right-handed 310
Helix 2	AA2	A	106	110	Right-handed 310
Helix 3	AA3	B	143	147	Right-handed 310
Helix 4	AA4	B	203	209	Right-handed alpha
Helix 5	AA5	C	47	51	Right-handed 310
Helix 6	AA6	C	106	110	Right-handed 310
Helix 7	AA7	D	99	103	Right-handed 310
Helix 8	AA8	D	143	147	Right-handed 310
Helix 9	AA9	D	203	209	Right-handed alpha

There are 27 sheets in PDB entry 6R0X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	22	25	first strand
Strand 2	A	37	44	anti-parallel
Strand 3	A	97	102	anti-parallel
Strand 4	A	87	92	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	31	first strand
Strand 2	A	132	136	parallel
Strand 3	A	111	118	anti-parallel
Strand 4	A	52	58	anti-parallel
Strand 5	A	64	70	anti-parallel
Strand 6	A	78	79	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	31	first strand
Strand 2	A	132	136	parallel
Strand 3	A	111	118	anti-parallel
Strand 4	A	125	128	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	145	149	first strand
Strand 2	A	161	170	anti-parallel
Strand 3	A	200	208	anti-parallel
Strand 4	A	188	190	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	145	149	first strand
Strand 2	A	161	170	anti-parallel
Strand 3	A	200	208	anti-parallel
Strand 4	A	194	195	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	176	179	first strand
Strand 2	A	219	224	anti-parallel
Strand 3	A	229	234	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	24	26	first strand
Strand 2	B	39	45	anti-parallel
Strand 3	B	90	95	anti-parallel
Strand 4	B	82	87	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	30	33	first strand
Strand 2	B	122	126	parallel
Strand 3	B	105	110	anti-parallel
Strand 4	B	53	58	anti-parallel
Strand 5	B	64	68	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	30	33	first strand
Strand 2	B	122	126	parallel
Strand 3	B	105	110	anti-parallel
Strand 4	B	117	118	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	136	138	first strand
Strand 2	B	149	159	anti-parallel
Strand 3	B	193	202	anti-parallel
Strand 4	B	179	183	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	165	167	first strand
Strand 2	B	211	217	anti-parallel
Strand 3	B	225	230	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	169	170	first strand
Strand 2	B	173	174	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	23	25	first strand
Strand 2	C	37	43	anti-parallel
Strand 3	C	97	102	anti-parallel
Strand 4	C	87	92	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	31	first strand
Strand 2	C	132	136	parallel
Strand 3	C	111	118	anti-parallel
Strand 4	C	52	58	anti-parallel
Strand 5	C	64	70	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	31	first strand
Strand 2	C	132	136	parallel
Strand 3	C	111	118	anti-parallel
Strand 4	C	125	128	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	145	149	first strand
Strand 2	C	160	170	anti-parallel
Strand 3	C	200	209	anti-parallel
Strand 4	C	188	190	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	145	149	first strand
Strand 2	C	160	170	anti-parallel
Strand 3	C	200	209	anti-parallel
Strand 4	C	194	195	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	176	179	first strand
Strand 2	C	219	224	anti-parallel
Strand 3	C	229	234	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	24	25	first strand
Strand 2	D	39	45	anti-parallel
Strand 3	D	90	95	anti-parallel
Strand 4	D	82	86	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	30	34	first strand
Strand 2	D	122	127	parallel
Strand 3	D	105	110	anti-parallel
Strand 4	D	53	58	anti-parallel
Strand 5	D	64	68	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	135	138	first strand
Strand 2	D	149	159	anti-parallel
Strand 3	D	193	202	anti-parallel
Strand 4	D	179	183	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	173	174	first strand
Strand 2	D	165	170	anti-parallel
Strand 3	D	212	217	anti-parallel
Strand 4	D	225	229	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	21	25	first strand
Strand 2	E	118	122	parallel
Strand 3	E	104	106	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	30	33	first strand
Strand 2	E	94	97	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	64	65	first strand
Strand 2	E	45	46	anti-parallel
Strand 3	E	108	109	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	21	25	first strand
Strand 2	F	115	122	parallel
Strand 3	F	104	109	anti-parallel
Strand 4	F	45	46	anti-parallel
Strand 5	F	64	65	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	30	33	first strand
Strand 2	F	94	97	anti-parallel
Strand 3	F	81	82	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6R0X

Analysis of interatomic Contacts of Structural Units in PDB entry:
6R0X