Analysis of interatomic Contacts of Structural Units in PDB entry:
6R1H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6R1H entry

There are 2 chains in PDB entry 6R1H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 34PRO 224
B
 TRP 34ALA 223
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 6R1H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 53Right-handed alpha
Helix 2
AA2
A
104 110Right-handed 310
Helix 3
AA3
A
128 134Right-handed 310
Helix 4
AA4
A
152 158Right-handed 310
Helix 5
AA5
A
175 179Right-handed 310
Helix 6
AA6
A
199 205Right-handed 310
Helix 7
AA7
B
38 53Right-handed alpha
Helix 8
AA8
B
65 69Right-handed 310
Helix 9
AA9
B
104 110Right-handed 310
Helix 10
AB1
B
128 134Right-handed 310
Helix 11
AB2
B
152 158Right-handed 310
Helix 12
AB3
B
175 181Right-handed 310
Helix 13
AB4
B
201 205Right-handed 310
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There are 5 sheets in PDB entry 6R1H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 78first strand
Strand 2
A
85 93anti-parallel
Strand 3
A
115 117parallel
Strand 4
A
139 141parallel
Strand 5
A
163 165parallel
Strand 6
A
186 188parallel
Strand 7
A
210 212parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 125first strand
Strand 2
A
146 150parallel
Strand 3
A
170 173parallel
Strand 4
A
193 194parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 197first strand
Strand 2
A
219 220parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 78first strand
Strand 2
B
85 93anti-parallel
Strand 3
B
115 117parallel
Strand 4
B
139 141parallel
Strand 5
B
163 165parallel
Strand 6
B
186 188parallel
Strand 7
B
210 212parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 125first strand
Strand 2
B
146 150parallel
Strand 3
B
170 173parallel
Strand 4
B
193 197parallel
Strand 5
B
218 220parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il