Analysis of interatomic Contacts of Structural Units in PDB entry:
6R2H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6R2H entry

There are 2 chains in PDB entry 6R2H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2ALA 193
B
 THR 3LYS 192
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6R2H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
61 65Right-handed 310
Helix 2
AA2
A
92 96Right-handed 310
Helix 3
AA3
A
118 123Right-handed alpha
Helix 4
AA4
A
135 138Right-handed 310
Helix 5
AA5
B
61 65Right-handed 310
Helix 6
AA6
B
92 96Right-handed 310
Helix 7
AA7
B
118 123Right-handed alpha
Helix 8
AA8
B
135 138Right-handed 310
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There are 8 sheets in PDB entry 6R2H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 11first strand
Strand 2
A
181 190anti-parallel
Strand 3
A
165 174anti-parallel
Strand 4
A
155 160anti-parallel
Strand 5
A
83 87anti-parallel
Strand 6
A
105 106anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 32first strand
Strand 2
A
17 21anti-parallel
Strand 3
A
71 74anti-parallel
Strand 4
A
77 80anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 56first strand
Strand 2
A
37 42anti-parallel
Strand 3
A
124 132anti-parallel
Strand 4
A
108 115anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 141first strand
Strand 2
A
150 151anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 11first strand
Strand 2
B
181 190anti-parallel
Strand 3
B
165 174anti-parallel
Strand 4
B
155 160anti-parallel
Strand 5
B
83 87anti-parallel
Strand 6
B
105 106anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 32first strand
Strand 2
B
17 22anti-parallel
Strand 3
B
71 74anti-parallel
Strand 4
B
77 80anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 56first strand
Strand 2
B
37 42anti-parallel
Strand 3
B
124 132anti-parallel
Strand 4
B
108 115anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
140 141first strand
Strand 2
B
150 151anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il