Analysis of interatomic Contacts of Structural Units in PDB entry:
6R2P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6R2P entry

There is 1 chain in PDB entry 6R2P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3SER 499
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6R2P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 8Right-handed 310
Helix 2
AA2
A
9 20Right-handed alpha
Helix 3
AA3
A
34 47Right-handed alpha
Helix 4
AA4
A
81 87Right-handed alpha
Helix 5
AA5
A
95 105Right-handed alpha
Helix 6
AA6
A
106 109Right-handed 310
Helix 7
AA7
A
120 124Right-handed 310
Helix 8
AA8
A
133 137Right-handed 310
Helix 9
AA9
A
190 203Right-handed alpha
Helix 10
AB1
A
216 224Right-handed alpha
Helix 11
AB2
A
232 242Right-handed alpha
Helix 12
AB3
A
321 326Right-handed alpha
Helix 13
AB4
A
326 342Right-handed alpha
Helix 14
AB5
A
352 356Right-handed 310
Helix 15
AB6
A
365 373Right-handed alpha
Helix 16
AB7
A
375 389Right-handed alpha
Helix 17
AB8
A
390 394Right-handed 310
Helix 18
AB9
A
410 422Right-handed alpha
Helix 19
AC1
A
440 445Right-handed alpha
Helix 20
AC2
A
462 467Right-handed 310
Helix 21
AC3
A
482 492Right-handed alpha
Helix 22
AC4
A
492 497Right-handed alpha
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There are 5 sheets in PDB entry 6R2P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 26first strand
Strand 2
A
50 53parallel
Strand 3
A
65 68anti-parallel
Strand 4
A
310 313parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 116first strand
Strand 2
A
246 249parallel
Strand 3
A
256 258anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 128first strand
Strand 2
A
293 305anti-parallel
Strand 3
A
263 277anti-parallel
Strand 4
A
207 213anti-parallel
Strand 5
A
156 160anti-parallel
Strand 6
A
167 170anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 128first strand
Strand 2
A
293 305anti-parallel
Strand 3
A
181 184anti-parallel
Strand 4
A
174 178anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
346 350first strand
Strand 2
A
359 364anti-parallel
Strand 3
A
398 402parallel
Strand 4
A
455 459parallel
Strand 5
A
428 431anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il