Analysis of interatomic Contacts of Structural Units in PDB entry:
6R2Q

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6R2Q entry

There are 3 chains in PDB entry 6R2Q (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 62	ARG 333
B	VAL 47	ILE 695
C	ALA 43	MET 650

There are 44 helices in PDB entry 6R2Q. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	66	71	Right-handed alpha
Helix 2	AA2	A	99	104	Right-handed alpha
Helix 3	AA3	A	133	141	Right-handed alpha
Helix 4	AA4	A	147	151	Right-handed 310
Helix 5	AA5	A	153	157	Right-handed 310
Helix 6	AA6	A	159	164	Right-handed alpha
Helix 7	AA7	A	171	175	Right-handed 310
Helix 8	AA8	A	178	184	Right-handed alpha
Helix 9	AA9	A	187	194	Right-handed alpha
Helix 10	AB1	A	208	212	Right-handed 310
Helix 11	AB2	A	228	235	Right-handed alpha
Helix 12	AB3	A	237	241	Right-handed 310
Helix 13	AB4	A	248	254	Right-handed alpha
Helix 14	AB5	A	255	258	Right-handed 310
Helix 15	AB6	A	266	270	Right-handed 310
Helix 16	AB7	A	273	282	Right-handed alpha
Helix 17	AB8	A	311	316	Right-handed 310
Helix 18	AB9	B	68	73	Right-handed alpha
Helix 19	AC1	B	161	165	Right-handed 310
Helix 20	AC2	B	167	172	Right-handed alpha
Helix 21	AC3	B	665	669	Right-handed 310
Helix 22	AC4	C	137	141	Right-handed 310
Helix 23	AC5	C	194	203	Right-handed alpha
Helix 24	AC6	C	204	213	Right-handed 310
Helix 25	AC7	C	216	224	Right-handed alpha
Helix 26	AC8	C	234	244	Right-handed alpha
Helix 27	AC9	C	248	257	Right-handed 310
Helix 28	AD1	C	268	273	Right-handed alpha
Helix 29	AD2	C	275	283	Right-handed alpha
Helix 30	AD3	C	302	307	Right-handed alpha
Helix 31	AD4	C	308	328	Right-handed alpha
Helix 32	AD5	C	360	365	Right-handed alpha
Helix 33	AD6	C	428	431	Right-handed 310
Helix 34	AD7	C	484	493	Right-handed alpha
Helix 35	AD8	C	509	513	Right-handed 310
Helix 36	AD9	C	526	532	Right-handed 310
Helix 37	AE1	C	547	558	Right-handed alpha
Helix 38	AE2	C	564	568	Right-handed 310
Helix 39	AE3	C	573	580	Right-handed 310
Helix 40	AE4	C	592	599	Right-handed alpha
Helix 41	AE5	C	603	607	Right-handed 310
Helix 42	AE6	C	611	615	Right-handed 310
Helix 43	AE7	C	621	628	Right-handed alpha
Helix 44	AE8	C	633	638	Right-handed alpha

There are 11 sheets in PDB entry 6R2Q. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 27 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	85	88	first strand
Strand 2	B	52	63	anti-parallel
Strand 3	B	680	695	anti-parallel
Strand 4	B	644	659	anti-parallel
Strand 5	B	625	638	anti-parallel
Strand 6	B	598	615	anti-parallel
Strand 7	B	572	590	anti-parallel
Strand 8	B	546	563	anti-parallel
Strand 9	B	525	540	anti-parallel
Strand 10	B	506	518	anti-parallel
Strand 11	B	489	500	anti-parallel
Strand 12	B	452	464	anti-parallel
Strand 13	B	433	445	anti-parallel
Strand 14	B	413	425	anti-parallel
Strand 15	B	396	407	anti-parallel
Strand 16	B	356	369	anti-parallel
Strand 17	B	337	350	anti-parallel
Strand 18	B	304	317	anti-parallel
Strand 19	B	288	299	anti-parallel
Strand 20	B	246	259	anti-parallel
Strand 21	B	221	242	anti-parallel
Strand 22	B	196	216	anti-parallel
Strand 23	B	177	191	anti-parallel
Strand 24	B	121	135	anti-parallel
Strand 25	B	110	113	anti-parallel
Strand 26	B	99	102	anti-parallel
Strand 27	B	85	87	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	138	140	first strand
Strand 2	B	173	175	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	263	267	first strand
Strand 2	B	279	283	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	375	378	first strand
Strand 2	B	387	390	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	613	616	first strand
Strand 2	B	618	621	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	121	124	first strand
Strand 2	C	129	133	anti-parallel
Strand 3	C	62	70	anti-parallel
Strand 4	C	50	59	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	172	178	first strand
Strand 2	C	152	158	anti-parallel
Strand 3	C	82	91	anti-parallel
Strand 4	C	103	113	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	331	338	first strand
Strand 2	C	344	351	anti-parallel
Strand 3	C	416	420	anti-parallel
Strand 4	C	411	413	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	464	469	first strand
Strand 2	C	433	442	anti-parallel
Strand 3	C	367	376	anti-parallel
Strand 4	C	396	402	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	441	443	first strand
Strand 2	C	458	460	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	583	586	first strand
Strand 2	C	589	591	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6R2Q

Analysis of interatomic Contacts of Structural Units in PDB entry:
6R2Q