Analysis of interatomic Contacts of Structural Units in PDB entry:
6R44


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6R44 entry

There are 2 chains in PDB entry 6R44 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 41LEU 320
B
 ARG 42LEU 320
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6R44. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 61Right-handed alpha
Helix 2
AA2
A
82 89Right-handed alpha
Helix 3
AA3
A
90 92Right-handed 310
Helix 4
AA4
A
103 112Right-handed alpha
Helix 5
AA5
A
147 150Right-handed 310
Helix 6
AA6
A
151 170Right-handed alpha
Helix 7
AA7
A
173 198Right-handed alpha
Helix 8
AA8
A
216 222Right-handed alpha
Helix 9
AA9
A
240 254Right-handed alpha
Helix 10
AB1
A
269 278Right-handed alpha
Helix 11
AB2
A
295 315Right-handed alpha
Helix 12
AB3
B
49 61Right-handed alpha
Helix 13
AB4
B
82 89Right-handed alpha
Helix 14
AB5
B
90 92Right-handed 310
Helix 15
AB6
B
103 112Right-handed alpha
Helix 16
AB7
B
147 150Right-handed 310
Helix 17
AB8
B
151 170Right-handed alpha
Helix 18
AB9
B
173 198Right-handed alpha
Helix 19
AC1
B
216 222Right-handed alpha
Helix 20
AC2
B
240 254Right-handed alpha
Helix 21
AC3
B
269 278Right-handed alpha
Helix 22
AC4
B
295 315Right-handed alpha
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There are 4 sheets in PDB entry 6R44. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 68first strand
Strand 2
A
44 47parallel
Strand 3
A
94 97parallel
Strand 4
A
120 122parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 230first strand
Strand 2
A
209 211parallel
Strand 3
A
258 262parallel
Strand 4
A
280 284parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 68first strand
Strand 2
B
44 47parallel
Strand 3
B
94 97parallel
Strand 4
B
120 122parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
229 230first strand
Strand 2
B
209 211parallel
Strand 3
B
258 262parallel
Strand 4
B
280 284parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il