Analysis of interatomic Contacts of Structural Units in PDB entry:
6R4O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6R4O entry

There are 2 chains in PDB entry 6R4O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 97LYS 1245
B
 LYS 28GLN 390
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 6R4O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
98 108Right-handed alpha
Helix 2
AA2
A
108 134Right-handed alpha
Helix 3
AA3
A
145 163Right-handed alpha
Helix 4
AA4
A
171 192Right-handed alpha
Helix 5
AA5
A
219 238Right-handed alpha
Helix 6
AA6
A
241 262Right-handed alpha
Helix 7
AA7
A
280 335Right-handed alpha
Helix 8
AA8
A
339 346Right-handed alpha
Helix 9
AA9
A
351 356Right-handed alpha
Helix 10
AB1
A
413 433Right-handed alpha
Helix 11
AB2
A
457 481Right-handed alpha
Helix 12
AB3
A
511 523Right-handed alpha
Helix 13
AB4
A
532 537Right-handed alpha
Helix 14
AB5
A
782 807Right-handed alpha
Helix 15
AB6
A
818 843Right-handed alpha
Helix 16
AB7
A
850 857Right-handed alpha
Helix 17
AB8
A
861 881Right-handed alpha
Helix 18
AB9
A
882 884Right-handed 310
Helix 19
AC1
A
891 906Right-handed alpha
Helix 20
AC2
A
907 912Right-handed 310
Helix 21
AC3
A
916 928Right-handed alpha
Helix 22
AC4
A
929 937Right-handed alpha
Helix 23
AC5
A
979 1037Right-handed alpha
Helix 24
AC6
A
1038 1046Right-handed alpha
Helix 25
AC7
A
1079 1097Right-handed alpha
Helix 26
AC8
A
1098 1099Right-handed 310
Helix 27
AC9
A
1100 1104Right-handed 310
Helix 28
AD1
A
1133 1157Right-handed alpha
Helix 29
AD2
A
1190 1201Right-handed alpha
Helix 30
AD3
A
1210 1218Right-handed alpha
Helix 31
AD4
A
1219 1221Right-handed 310
Helix 32
AD5
B
30 39Right-handed alpha
Helix 33
AD6
B
52 64Right-handed alpha
Helix 34
AD7
B
89 110Right-handed alpha
Helix 35
AD8
B
121 123Right-handed 310
Helix 36
AD9
B
124 134Right-handed alpha
Helix 37
AE1
B
143 155Right-handed alpha
Helix 38
AE2
B
156 164Right-handed alpha
Helix 39
AE3
B
165 169Right-handed 310
Helix 40
AE4
B
174 185Right-handed alpha
Helix 41
AE5
B
193 199Right-handed alpha
Helix 42
AE6
B
228 238Right-handed 310
Helix 43
AE7
B
264 278Right-handed alpha
Helix 44
AE8
B
293 304Right-handed alpha
Helix 45
AE9
B
331 351Right-handed alpha
Helix 46
AF1
B
368 388Right-handed alpha
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There are 5 sheets in PDB entry 6R4O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
436 441first strand
Strand 2
A
444 449anti-parallel
Strand 3
A
387 400anti-parallel
Strand 4
A
486 498anti-parallel
Strand 5
A
508 510anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
436 441first strand
Strand 2
A
444 449anti-parallel
Strand 3
A
387 400anti-parallel
Strand 4
A
486 498anti-parallel
Strand 5
A
529 531parallel
Strand 6
A
568 571anti-parallel
Strand 7
A
545 548anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1106 1107first strand
Strand 2
A
1114 1118anti-parallel
Strand 3
A
1052 1065anti-parallel
Strand 4
A
1164 1177anti-parallel
Strand 5
A
1185 1188anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1106 1107first strand
Strand 2
A
1114 1118anti-parallel
Strand 3
A
1052 1065anti-parallel
Strand 4
A
1164 1177anti-parallel
Strand 5
A
1207 1209parallel
Strand 6
A
1236 1242anti-parallel
Strand 7
A
1225 1232anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
208 213first strand
Strand 2
B
218 223anti-parallel
Strand 3
B
42 45parallel
Strand 4
B
243 249parallel
Strand 5
B
287 292parallel
Strand 6
B
359 361parallel
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