Analysis of interatomic Contacts of Structural Units in PDB entry:
6R57


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6R57 entry

There are 4 chains in PDB entry 6R57 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 29LYS 220
B
 THR 29LYS 220
C
 GLU 11VAL 16
D
 GLU 11VAL 16
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6R57. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 40Right-handed alpha
Helix 2
AA2
A
50 62Right-handed alpha
Helix 3
AA3
A
65 75Right-handed alpha
Helix 4
AA4
A
85 96Right-handed 310
Helix 5
AA5
A
109 113Right-handed 310
Helix 6
AA6
A
138 151Right-handed alpha
Helix 7
AA7
A
155 158Right-handed 310
Helix 8
AA8
A
159 170Right-handed alpha
Helix 9
AA9
A
182 197Right-handed alpha
Helix 10
AB1
A
197 208Right-handed alpha
Helix 11
AB2
A
208 219Right-handed alpha
Helix 12
AB3
B
30 41Right-handed alpha
Helix 13
AB4
B
50 62Right-handed alpha
Helix 14
AB5
B
65 75Right-handed alpha
Helix 15
AB6
B
85 96Right-handed 310
Helix 16
AB7
B
109 113Right-handed 310
Helix 17
AB8
B
138 151Right-handed alpha
Helix 18
AB9
B
155 158Right-handed 310
Helix 19
AC1
B
159 170Right-handed alpha
Helix 20
AC2
B
175 180Right-handed alpha
Helix 21
AC3
B
182 197Right-handed alpha
Helix 22
AC4
B
197 208Right-handed alpha
Helix 23
AC5
B
208 220Right-handed alpha
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There are 2 sheets in PDB entry 6R57. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 43first strand
Strand 2
A
79 82parallel
Strand 3
A
121 124parallel
Strand 4
A
115 118anti-parallel
Strand 5
C
12 13anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
42 43first strand
Strand 2
B
79 82parallel
Strand 3
B
121 124parallel
Strand 4
B
115 118anti-parallel
Strand 5
D
12 13anti-parallel
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