Analysis of interatomic Contacts of Structural Units in PDB entry:
6R5H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6R5H entry

There is 1 chain in PDB entry 6R5H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 7VAL 356
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 6R5H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
55 60Right-handed alpha
Helix 2
AA2
A
65 69Right-handed 310
Helix 3
AA3
A
132 136Right-handed 310
Helix 4
AA4
A
142 150Right-handed alpha
Helix 5
AA5
A
201 205Right-handed 310
Helix 6
AA6
A
247 256Right-handed alpha
Helix 7
AA7
A
265 269Right-handed 310
Helix 8
AA8
A
296 301Right-handed alpha
Helix 9
AA9
A
332 337Right-handed alpha
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There are 6 sheets in PDB entry 6R5H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 12first strand
Strand 2
A
179 183anti-parallel
Strand 3
A
157 162anti-parallel
Strand 4
A
340 344anti-parallel
Strand 5
A
349 355anti-parallel
Strand 6
A
191 199anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 83first strand
Strand 2
A
86 99anti-parallel
Strand 3
A
21 28anti-parallel
Strand 4
A
14 16anti-parallel
Strand 5
A
174 175anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 83first strand
Strand 2
A
86 99anti-parallel
Strand 3
A
102 115anti-parallel
Strand 4
A
46 49parallel
Strand 5
A
126 129anti-parallel
Strand 6
A
33 40parallel
Strand 7
A
21 28anti-parallel
Strand 8
A
14 16anti-parallel
Strand 9
A
174 175anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 211first strand
Strand 2
A
234 237anti-parallel
Strand 3
A
329 331parallel
Strand 4
A
244 246anti-parallel
Strand 5
A
316 318parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 221first strand
Strand 2
A
214 217anti-parallel
Strand 3
A
284 288anti-parallel
Strand 4
A
291 295anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 263first strand
Strand 2
A
274 277anti-parallel
Strand 3
A
311 313anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il