Analysis of interatomic Contacts of Structural Units in PDB entry:
6R5P

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6R5P entry

There are 2 chains in PDB entry 6R5P (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	THR 32	LEU 764
A	THR 32	LEU 764

There are 62 helices in PDB entry 6R5P. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	32	45	Right-handed alpha
Helix 2	AA2	B	46	53	Right-handed alpha
Helix 3	AA3	B	64	74	Right-handed alpha
Helix 4	AA4	B	85	94	Right-handed alpha
Helix 5	AA5	B	95	99	Right-handed 310
Helix 6	AA6	B	121	127	Right-handed alpha
Helix 7	AA7	B	130	148	Right-handed alpha
Helix 8	AA8	B	166	172	Right-handed 310
Helix 9	AA9	B	176	193	Right-handed alpha
Helix 10	AB1	B	211	219	Right-handed 310
Helix 11	AB2	B	227	235	Right-handed alpha
Helix 12	AB3	B	236	245	Right-handed alpha
Helix 13	AB4	B	265	270	Right-handed alpha
Helix 14	AB5	B	290	295	Right-handed 310
Helix 15	AB6	B	301	313	Right-handed alpha
Helix 16	AB7	B	321	333	Right-handed alpha
Helix 17	AB8	B	337	355	Right-handed alpha
Helix 18	AB9	B	377	381	Right-handed 310
Helix 19	AC1	B	382	394	Right-handed alpha
Helix 20	AC2	B	401	403	Right-handed 310
Helix 21	AC3	B	421	426	Right-handed alpha
Helix 22	AC4	B	434	438	Right-handed 310
Helix 23	AC5	B	440	450	Right-handed alpha
Helix 24	AC6	B	466	474	Right-handed alpha
Helix 25	AC7	B	486	500	Right-handed alpha
Helix 26	AC8	B	511	515	Right-handed 310
Helix 27	AC9	B	527	539	Right-handed alpha
Helix 28	AD1	B	556	563	Right-handed alpha
Helix 29	AD2	B	575	585	Right-handed alpha
Helix 30	AD3	B	601	605	Right-handed 310
Helix 31	AD4	B	725	730	Right-handed 310
Helix 32	AD5	A	33	44	Right-handed alpha
Helix 33	AD6	A	46	53	Right-handed alpha
Helix 34	AD7	A	64	74	Right-handed alpha
Helix 35	AD8	A	85	94	Right-handed alpha
Helix 36	AD9	A	95	99	Right-handed 310
Helix 37	AE1	A	121	127	Right-handed alpha
Helix 38	AE2	A	130	148	Right-handed alpha
Helix 39	AE3	A	166	172	Right-handed 310
Helix 40	AE4	A	176	193	Right-handed alpha
Helix 41	AE5	A	211	219	Right-handed 310
Helix 42	AE6	A	227	235	Right-handed alpha
Helix 43	AE7	A	236	245	Right-handed alpha
Helix 44	AE8	A	265	270	Right-handed alpha
Helix 45	AE9	A	290	295	Right-handed 310
Helix 46	AF1	A	301	313	Right-handed alpha
Helix 47	AF2	A	321	333	Right-handed alpha
Helix 48	AF3	A	337	355	Right-handed alpha
Helix 49	AF4	A	377	381	Right-handed 310
Helix 50	AF5	A	382	393	Right-handed alpha
Helix 51	AF6	A	401	403	Right-handed 310
Helix 52	AF7	A	421	426	Right-handed alpha
Helix 53	AF8	A	434	438	Right-handed 310
Helix 54	AF9	A	440	450	Right-handed alpha
Helix 55	AG1	A	466	474	Right-handed alpha
Helix 56	AG2	A	486	500	Right-handed alpha
Helix 57	AG3	A	511	515	Right-handed 310
Helix 58	AG4	A	527	539	Right-handed alpha
Helix 59	AG5	A	556	563	Right-handed alpha
Helix 60	AG6	A	575	585	Right-handed alpha
Helix 61	AG7	A	601	605	Right-handed 310
Helix 62	AG8	A	725	730	Right-handed 310

There are 14 sheets in PDB entry 6R5P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	282	284	first strand
Strand 2	B	249	252	parallel
Strand 3	B	203	209	parallel
Strand 4	B	152	153	parallel
Strand 5	B	106	109	parallel
Strand 6	B	79	81	parallel
Strand 7	B	55	57	parallel
Strand 8	B	317	318	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	256	257	first strand
Strand 2	B	260	261	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	395	399	first strand
Strand 2	B	565	568	anti-parallel
Strand 3	B	544	549	parallel
Strand 4	B	503	509	parallel
Strand 5	B	411	415	parallel
Strand 6	B	454	458	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	650	652	first strand
Strand 2	B	668	676	anti-parallel
Strand 3	B	656	657	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	650	652	first strand
Strand 2	B	668	676	anti-parallel
Strand 3	B	717	724	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	661	662	first strand
Strand 2	B	756	763	parallel
Strand 3	B	743	750	anti-parallel
Strand 4	B	682	691	anti-parallel
Strand 5	B	703	712	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	731	732	first strand
Strand 2	B	738	739	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	282	284	first strand
Strand 2	A	249	252	parallel
Strand 3	A	203	209	parallel
Strand 4	A	152	153	parallel
Strand 5	A	106	109	parallel
Strand 6	A	79	81	parallel
Strand 7	A	55	57	parallel
Strand 8	A	317	318	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	256	257	first strand
Strand 2	A	260	261	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	395	399	first strand
Strand 2	A	565	568	anti-parallel
Strand 3	A	544	549	parallel
Strand 4	A	503	509	parallel
Strand 5	A	411	415	parallel
Strand 6	A	454	458	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	650	652	first strand
Strand 2	A	668	676	anti-parallel
Strand 3	A	656	657	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	650	652	first strand
Strand 2	A	668	676	anti-parallel
Strand 3	A	717	724	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	661	662	first strand
Strand 2	A	756	763	parallel
Strand 3	A	743	750	anti-parallel
Strand 4	A	682	691	anti-parallel
Strand 5	A	703	712	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	731	732	first strand
Strand 2	A	738	739	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6R5P

Analysis of interatomic Contacts of Structural Units in PDB entry:
6R5P