Analysis of interatomic Contacts of Structural Units in PDB entry:
6R6K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6R6K entry

There are 2 chains in PDB entry 6R6K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 41SER 315
B
 LEU 43SER 315
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6R6K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 61Right-handed alpha
Helix 2
AA2
A
82 89Right-handed alpha
Helix 3
AA3
A
90 92Right-handed 310
Helix 4
AA4
A
103 113Right-handed alpha
Helix 5
AA5
A
134 140Right-handed alpha
Helix 6
AA6
A
147 150Right-handed 310
Helix 7
AA7
A
151 170Right-handed alpha
Helix 8
AA8
A
173 201Right-handed alpha
Helix 9
AA9
A
203 206Right-handed 310
Helix 10
AB1
A
216 223Right-handed alpha
Helix 11
AB2
A
240 253Right-handed alpha
Helix 12
AB3
A
266 278Right-handed alpha
Helix 13
AB4
A
295 315Right-handed alpha
Helix 14
AB5
B
49 61Right-handed alpha
Helix 15
AB6
B
82 88Right-handed alpha
Helix 16
AB7
B
89 92Right-handed 310
Helix 17
AB8
B
103 113Right-handed alpha
Helix 18
AB9
B
134 139Right-handed alpha
Helix 19
AC1
B
147 150Right-handed 310
Helix 20
AC2
B
151 170Right-handed alpha
Helix 21
AC3
B
173 200Right-handed alpha
Helix 22
AC4
B
203 206Right-handed 310
Helix 23
AC5
B
216 223Right-handed alpha
Helix 24
AC6
B
240 253Right-handed alpha
Helix 25
AC7
B
266 278Right-handed alpha
Helix 26
AC8
B
295 315Right-handed alpha
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There are 5 sheets in PDB entry 6R6K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 68first strand
Strand 2
A
43 47parallel
Strand 3
A
94 97parallel
Strand 4
A
120 122parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 131first strand
Strand 2
A
144 145anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 231first strand
Strand 2
A
208 212parallel
Strand 3
A
258 261parallel
Strand 4
A
280 283parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 68first strand
Strand 2
B
44 47parallel
Strand 3
B
94 97parallel
Strand 4
B
120 122parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
226 231first strand
Strand 2
B
208 212parallel
Strand 3
B
258 261parallel
Strand 4
B
280 283parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il