Analysis of interatomic Contacts of Structural Units in PDB entry:
6R72

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6R72 entry

There are 3 chains in PDB entry 6R72 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 10	GLY 589
B	LYS 9	ASN 586
C	SER 10	LEU 166

There are118 helices in PDB entry 6R72. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	12	22	Right-handed alpha
Helix 2	AA2	A	28	44	Right-handed alpha
Helix 3	AA3	A	45	50	Right-handed alpha
Helix 4	AA4	A	52	57	Right-handed alpha
Helix 5	AA5	A	59	64	Right-handed alpha
Helix 6	AA6	A	66	71	Right-handed alpha
Helix 7	AA7	A	74	80	Right-handed alpha
Helix 8	AA8	A	80	109	Right-handed alpha
Helix 9	AA9	A	113	118	Right-handed alpha
Helix 10	AB1	A	119	129	Right-handed alpha
Helix 11	AB2	A	131	163	Right-handed alpha
Helix 12	AB3	A	165	171	Right-handed alpha
Helix 13	AB4	A	173	178	Right-handed alpha
Helix 14	AB5	A	181	194	Right-handed alpha
Helix 15	AB6	A	194	210	Right-handed alpha
Helix 16	AB7	A	211	216	Right-handed 310
Helix 17	AB8	A	221	238	Right-handed alpha
Helix 18	AB9	A	239	248	Right-handed alpha
Helix 19	AC1	A	250	264	Right-handed alpha
Helix 20	AC2	A	280	287	Right-handed alpha
Helix 21	AC3	A	289	322	Right-handed alpha
Helix 22	AC4	A	379	388	Right-handed alpha
Helix 23	AC5	A	409	414	Right-handed alpha
Helix 24	AC6	A	430	436	Right-handed alpha
Helix 25	AC7	A	444	455	Right-handed alpha
Helix 26	AC8	A	457	462	Right-handed alpha
Helix 27	AC9	A	480	496	Right-handed alpha
Helix 28	AD1	A	510	525	Right-handed alpha
Helix 29	AD2	A	570	575	Right-handed alpha
Helix 30	AD3	A	575	581	Right-handed alpha
Helix 31	AD4	A	583	588	Right-handed alpha
Helix 32	AD5	B	12	22	Right-handed alpha
Helix 33	AD6	B	26	44	Right-handed alpha
Helix 34	AD7	B	45	50	Right-handed alpha
Helix 35	AD8	B	53	59	Right-handed alpha
Helix 36	AD9	B	67	73	Right-handed 310
Helix 37	AE1	B	74	80	Right-handed alpha
Helix 38	AE2	B	80	109	Right-handed alpha
Helix 39	AE3	B	113	118	Right-handed alpha
Helix 40	AE4	B	119	129	Right-handed alpha
Helix 41	AE5	B	130	163	Right-handed alpha
Helix 42	AE6	B	164	171	Right-handed alpha
Helix 43	AE7	B	173	178	Right-handed alpha
Helix 44	AE8	B	181	194	Right-handed alpha
Helix 45	AE9	B	194	210	Right-handed alpha
Helix 46	AF1	B	212	217	Right-handed alpha
Helix 47	AF2	B	220	238	Right-handed alpha
Helix 48	AF3	B	239	248	Right-handed alpha
Helix 49	AF4	B	250	264	Right-handed alpha
Helix 50	AF5	B	265	270	Right-handed alpha
Helix 51	AF6	B	283	287	Right-handed alpha
Helix 52	AF7	B	289	322	Right-handed alpha
Helix 53	AF8	B	379	388	Right-handed alpha
Helix 54	AF9	B	409	416	Right-handed alpha
Helix 55	AG1	B	430	436	Right-handed alpha
Helix 56	AG2	B	444	456	Right-handed alpha
Helix 57	AG3	B	457	462	Right-handed alpha
Helix 58	AG4	B	480	496	Right-handed alpha
Helix 59	AG5	B	510	525	Right-handed alpha
Helix 60	AG6	B	559	564	Right-handed alpha
Helix 61	AG7	B	571	576	Right-handed alpha
Helix 62	AG8	B	581	586	Right-handed alpha
Helix 63	AG9	C	12	22	Right-handed alpha
Helix 64	AH1	C	26	44	Right-handed alpha
Helix 65	AH2	C	45	53	Right-handed alpha
Helix 66	AH3	C	54	64	Right-handed alpha
Helix 67	AH4	C	70	80	Right-handed alpha
Helix 68	AH5	C	80	109	Right-handed alpha
Helix 69	AH6	C	113	118	Right-handed alpha
Helix 70	AH7	C	119	129	Right-handed alpha
Helix 71	AH8	C	130	163	Right-handed alpha
Helix 72	AH9	C	164	171	Right-handed alpha
Helix 73	AI1	C	173	178	Right-handed alpha
Helix 74	AI2	C	181	202	Right-handed alpha
Helix 75	AI3	C	205	210	Right-handed alpha
Helix 76	AI4	C	212	216	Right-handed 310
Helix 77	AI5	C	224	238	Right-handed alpha
Helix 78	AI6	C	239	248	Right-handed alpha
Helix 79	AI7	C	250	264	Right-handed alpha
Helix 80	AI8	C	289	322	Right-handed alpha
Helix 81	AI9	C	379	389	Right-handed alpha
Helix 82	AJ1	C	409	414	Right-handed alpha
Helix 83	AJ2	C	430	436	Right-handed alpha
Helix 84	AJ3	C	444	456	Right-handed alpha
Helix 85	AJ4	C	456	463	Right-handed alpha
Helix 86	AJ5	C	480	496	Right-handed alpha
Helix 87	AJ6	C	510	525	Right-handed alpha
Helix 88	AJ7	C	559	567	Right-handed alpha
Helix 89	AJ8	C	578	583	Right-handed alpha
Helix 90	AJ9	C	584	586	Right-handed 310
Helix 91	AK1	D	12	21	Right-handed alpha
Helix 92	AK2	D	26	44	Right-handed alpha
Helix 93	AK3	D	45	50	Right-handed alpha
Helix 94	AK4	D	55	63	Right-handed alpha
Helix 95	AK5	D	67	74	Right-handed alpha
Helix 96	AK6	D	81	109	Right-handed alpha
Helix 97	AK7	D	113	118	Right-handed alpha
Helix 98	AK8	D	119	129	Right-handed alpha
Helix 99	AK9	D	131	163	Right-handed alpha
Helix 100	AL1	D	164	171	Right-handed alpha
Helix 101	AL2	D	173	178	Right-handed alpha
Helix 102	AL3	D	181	208	Right-handed alpha
Helix 103	AL4	D	213	218	Right-handed alpha
Helix 104	AL5	D	224	239	Right-handed alpha
Helix 105	AL6	D	240	248	Right-handed alpha
Helix 106	AL7	D	250	264	Right-handed alpha
Helix 107	AL8	D	265	270	Right-handed alpha
Helix 108	AL9	D	280	287	Right-handed alpha
Helix 109	AM1	D	289	322	Right-handed alpha
Helix 110	AM2	D	379	388	Right-handed alpha
Helix 111	AM3	D	409	415	Right-handed alpha
Helix 112	AM4	D	430	436	Right-handed alpha
Helix 113	AM5	D	444	455	Right-handed alpha
Helix 114	AM6	D	457	464	Right-handed alpha
Helix 115	AM7	D	480	496	Right-handed alpha
Helix 116	AM8	D	510	525	Right-handed alpha
Helix 117	AM9	D	559	567	Right-handed alpha
Helix 118	AN1	D	575	583	Right-handed alpha

There are 10 sheets in PDB entry 6R72. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	341	344	first strand
Strand 2	A	397	400	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	346	348	first strand
Strand 2	A	357	360	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	500	503	first strand
Strand 2	A	530	533	parallel
Strand 3	A	371	372	parallel
Strand 4	A	546	550	parallel
Strand 5	A	553	557	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	346	348	first strand
Strand 2	B	357	360	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	500	503	first strand
Strand 2	B	530	533	parallel
Strand 3	B	369	373	parallel
Strand 4	B	546	550	parallel
Strand 5	B	553	557	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	341	344	first strand
Strand 2	C	397	400	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	348	351	first strand
Strand 2	C	354	357	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	500	503	first strand
Strand 2	C	530	533	parallel
Strand 3	C	371	372	parallel
Strand 4	C	546	550	parallel
Strand 5	C	553	558	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	341	347	first strand
Strand 2	D	395	400	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	500	503	first strand
Strand 2	D	530	533	parallel
Strand 3	D	371	372	parallel
Strand 4	D	546	550	parallel
Strand 5	D	553	557	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6R72

Analysis of interatomic Contacts of Structural Units in PDB entry:
6R72