Analysis of interatomic Contacts of Structural Units in PDB entry:
6R7F

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6R7F entry

There are 14 chains in PDB entry 6R7F (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 37	PRO 469
B	VAL 30	ALA 443
C	MET 1	PHE 403
D	MET 1	GLN 406
E	SER 24	SER 334
F	SER 29	GLN 316
H	PHE 11	ASN 209
G	SER 8	ASN 215
V	MET 54	ASP 213
P	MET 1	GLN 118
Q	MET 1	CYS 112
O	MET 1	ALA 745
R	LYS 19	HIS 108
N	MET 1	MET 1

There are175 helices in PDB entry 6R7F. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	43	50	Right-handed alpha
Helix 2	AA2	A	52	67	Right-handed alpha
Helix 3	AA3	A	70	84	Right-handed alpha
Helix 4	AA4	A	88	104	Right-handed alpha
Helix 5	AA5	A	127	156	Right-handed alpha
Helix 6	AA6	A	157	176	Right-handed alpha
Helix 7	AA7	A	179	188	Right-handed alpha
Helix 8	AA8	A	194	213	Right-handed alpha
Helix 9	AA9	A	215	228	Right-handed alpha
Helix 10	AB1	A	244	261	Right-handed alpha
Helix 11	AB2	A	262	271	Right-handed alpha
Helix 12	AB3	A	285	299	Right-handed alpha
Helix 13	AB4	A	302	310	Right-handed alpha
Helix 14	AB5	A	316	323	Right-handed alpha
Helix 15	AB6	A	323	336	Right-handed alpha
Helix 16	AB7	A	337	355	Right-handed alpha
Helix 17	AB8	A	360	379	Right-handed alpha
Helix 18	AB9	A	386	394	Right-handed alpha
Helix 19	AC1	A	396	410	Right-handed alpha
Helix 20	AC2	A	430	462	Right-handed alpha
Helix 21	AC3	B	31	43	Right-handed alpha
Helix 22	AC4	B	49	60	Right-handed alpha
Helix 23	AC5	B	65	82	Right-handed alpha
Helix 24	AC6	B	84	97	Right-handed alpha
Helix 25	AC7	B	104	123	Right-handed alpha
Helix 26	AC8	B	124	139	Right-handed alpha
Helix 27	AC9	B	144	163	Right-handed alpha
Helix 28	AD1	B	165	176	Right-handed alpha
Helix 29	AD2	B	193	209	Right-handed alpha
Helix 30	AD3	B	210	223	Right-handed alpha
Helix 31	AD4	B	224	227	Right-handed 310
Helix 32	AD5	B	232	249	Right-handed alpha
Helix 33	AD6	B	250	269	Right-handed alpha
Helix 34	AD7	B	272	287	Right-handed alpha
Helix 35	AD8	B	301	304	Right-handed 310
Helix 36	AD9	B	305	321	Right-handed alpha
Helix 37	AE1	B	322	333	Right-handed alpha
Helix 38	AE2	B	333	339	Right-handed alpha
Helix 39	AE3	B	340	363	Right-handed alpha
Helix 40	AE4	B	371	379	Right-handed alpha
Helix 41	AE5	B	381	396	Right-handed alpha
Helix 42	AE6	B	418	441	Right-handed alpha
Helix 43	AE7	C	3	11	Right-handed alpha
Helix 44	AE8	C	11	16	Right-handed alpha
Helix 45	AE9	C	21	31	Right-handed alpha
Helix 46	AF1	C	36	46	Right-handed 310
Helix 47	AF2	C	54	64	Right-handed alpha
Helix 48	AF3	C	73	87	Right-handed alpha
Helix 49	AF4	C	92	95	Right-handed 310
Helix 50	AF5	C	96	114	Right-handed alpha
Helix 51	AF6	C	117	130	Right-handed alpha
Helix 52	AF7	C	140	152	Right-handed alpha
Helix 53	AF8	C	155	157	Right-handed 310
Helix 54	AF9	C	158	164	Right-handed alpha
Helix 55	AG1	C	177	196	Right-handed alpha
Helix 56	AG2	C	197	208	Right-handed alpha
Helix 57	AG3	C	217	235	Right-handed alpha
Helix 58	AG4	C	247	252	Right-handed alpha
Helix 59	AG5	C	252	257	Right-handed alpha
Helix 60	AG6	C	257	270	Right-handed alpha
Helix 61	AG7	C	271	282	Right-handed alpha
Helix 62	AG8	C	282	290	Right-handed alpha
Helix 63	AG9	C	293	313	Right-handed alpha
Helix 64	AH1	C	319	326	Right-handed alpha
Helix 65	AH2	C	330	345	Right-handed alpha
Helix 66	AH3	C	369	400	Right-handed alpha
Helix 67	AH4	D	2	14	Right-handed alpha
Helix 68	AH5	D	18	35	Right-handed alpha
Helix 69	AH6	D	38	54	Right-handed alpha
Helix 70	AH7	D	58	73	Right-handed alpha
Helix 71	AH8	D	74	76	Right-handed 310
Helix 72	AH9	D	77	93	Right-handed alpha
Helix 73	AI1	D	94	98	Right-handed 310
Helix 74	AI2	D	99	118	Right-handed alpha
Helix 75	AI3	D	119	129	Right-handed alpha
Helix 76	AI4	D	140	158	Right-handed alpha
Helix 77	AI5	D	160	176	Right-handed alpha
Helix 78	AI6	D	180	198	Right-handed alpha
Helix 79	AI7	D	200	214	Right-handed alpha
Helix 80	AI8	D	218	236	Right-handed alpha
Helix 81	AI9	D	240	251	Right-handed alpha
Helix 82	AJ1	D	252	258	Right-handed 310
Helix 83	AJ2	D	260	269	Right-handed alpha
Helix 84	AJ3	D	274	285	Right-handed alpha
Helix 85	AJ4	D	286	290	Right-handed 310
Helix 86	AJ5	D	300	314	Right-handed alpha
Helix 87	AJ6	D	321	329	Right-handed alpha
Helix 88	AJ7	D	331	345	Right-handed alpha
Helix 89	AJ8	D	366	392	Right-handed alpha
Helix 90	AJ9	D	392	406	Right-handed alpha
Helix 91	AK1	E	32	43	Right-handed alpha
Helix 92	AK2	E	44	47	Right-handed 310
Helix 93	AK3	E	58	73	Right-handed alpha
Helix 94	AK4	E	109	128	Right-handed alpha
Helix 95	AK5	E	148	162	Right-handed alpha
Helix 96	AK6	E	173	179	Right-handed alpha
Helix 97	AK7	E	210	218	Right-handed alpha
Helix 98	AK8	E	234	246	Right-handed alpha
Helix 99	AK9	E	247	252	Right-handed 310
Helix 100	AL1	E	253	258	Right-handed alpha
Helix 101	AL2	E	258	283	Right-handed alpha
Helix 102	AL3	E	298	330	Right-handed alpha
Helix 103	AL4	F	45	63	Right-handed alpha
Helix 104	AL5	F	101	116	Right-handed alpha
Helix 105	AL6	F	132	143	Right-handed alpha
Helix 106	AL7	F	193	206	Right-handed alpha
Helix 107	AL8	F	215	248	Right-handed alpha
Helix 108	AL9	F	254	266	Right-handed alpha
Helix 109	AM1	F	272	313	Right-handed alpha
Helix 110	AM2	H	12	27	Right-handed alpha
Helix 111	AM3	H	33	48	Right-handed alpha
Helix 112	AM4	H	49	60	Right-handed alpha
Helix 113	AM5	H	61	68	Right-handed alpha
Helix 114	AM6	H	69	84	Right-handed alpha
Helix 115	AM7	H	85	96	Right-handed alpha
Helix 116	AM8	H	102	124	Right-handed alpha
Helix 117	AM9	H	130	138	Right-handed alpha
Helix 118	AN1	H	140	152	Right-handed alpha
Helix 119	AN2	H	198	209	Right-handed alpha
Helix 120	AN3	G	9	22	Right-handed alpha
Helix 121	AN4	G	24	37	Right-handed alpha
Helix 122	AN5	G	44	49	Right-handed alpha
Helix 123	AN6	G	49	54	Right-handed alpha
Helix 124	AN7	G	60	73	Right-handed alpha
Helix 125	AN8	G	74	81	Right-handed alpha
Helix 126	AN9	G	89	108	Right-handed alpha
Helix 127	AO1	G	113	121	Right-handed alpha
Helix 128	AO2	G	124	139	Right-handed alpha
Helix 129	AO3	G	167	215	Right-handed alpha
Helix 130	AO4	V	157	170	Right-handed alpha
Helix 131	AO5	V	171	175	Right-handed 310
Helix 132	AO6	V	181	190	Right-handed alpha
Helix 133	AO7	V	193	209	Right-handed alpha
Helix 134	AO8	P	23	36	Right-handed alpha
Helix 135	AO9	P	56	61	Right-handed alpha
Helix 136	AP1	Q	14	16	Right-handed 310
Helix 137	AP2	Q	33	37	Right-handed alpha
Helix 138	AP3	Q	39	48	Right-handed alpha
Helix 139	AP4	Q	66	84	Right-handed alpha
Helix 140	AP5	Q	99	111	Right-handed alpha
Helix 141	AP6	O	9	25	Right-handed alpha
Helix 142	AP7	O	26	28	Right-handed 310
Helix 143	AP8	O	31	48	Right-handed alpha
Helix 144	AP9	O	52	79	Right-handed alpha
Helix 145	AQ1	O	82	105	Right-handed alpha
Helix 146	AQ2	O	105	112	Right-handed alpha
Helix 147	AQ3	O	138	148	Right-handed alpha
Helix 148	AQ4	O	149	151	Right-handed 310
Helix 149	AQ5	O	155	169	Right-handed alpha
Helix 150	AQ6	O	177	191	Right-handed alpha
Helix 151	AQ7	O	200	207	Right-handed alpha
Helix 152	AQ8	O	207	230	Right-handed alpha
Helix 153	AQ9	O	231	254	Right-handed alpha
Helix 154	AR1	O	255	271	Right-handed alpha
Helix 155	AR2	O	274	288	Right-handed alpha
Helix 156	AR3	O	290	304	Right-handed alpha
Helix 157	AR4	O	307	329	Right-handed alpha
Helix 158	AR5	O	335	357	Right-handed alpha
Helix 159	AR6	O	361	378	Right-handed alpha
Helix 160	AR7	O	385	400	Right-handed alpha
Helix 161	AR8	O	409	423	Right-handed alpha
Helix 162	AR9	O	427	446	Right-handed alpha
Helix 163	AS1	O	450	466	Right-handed alpha
Helix 164	AS2	O	466	493	Right-handed alpha
Helix 165	AS3	O	530	548	Right-handed alpha
Helix 166	AS4	O	579	587	Right-handed alpha
Helix 167	AS5	O	588	590	Right-handed 310
Helix 168	AS6	O	595	604	Right-handed alpha
Helix 169	AS7	O	606	620	Right-handed alpha
Helix 170	AS8	O	659	690	Right-handed alpha
Helix 171	AS9	O	696	708	Right-handed alpha
Helix 172	AT1	O	714	728	Right-handed alpha
Helix 173	AT2	R	53	60	Right-handed alpha
Helix 174	AT3	R	81	89	Right-handed alpha
Helix 175	AT4	N	23	35	Right-handed alpha

There are 15 sheets in PDB entry 6R7F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	369	370	first strand
Strand 2	B	408	411	anti-parallel
Strand 3	B	400	403	anti-parallel
Strand 4	A	381	385	parallel
Strand 5	A	423	425	anti-parallel
Strand 6	A	416	418	anti-parallel
Strand 7	C	314	318	parallel
Strand 8	C	357	360	anti-parallel
Strand 9	C	349	352	anti-parallel
Strand 10	H	125	129	parallel
Strand 11	H	161	163	anti-parallel
Strand 12	H	154	156	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	319	320	first strand
Strand 2	D	358	361	anti-parallel
Strand 3	D	350	353	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	54	57	first strand
Strand 2	E	89	97	parallel
Strand 3	E	78	86	anti-parallel
Strand 4	E	133	139	anti-parallel
Strand 5	E	167	170	parallel
Strand 6	E	183	188	anti-parallel
Strand 7	E	221	227	anti-parallel
Strand 8	E	54	57	parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	178	186	first strand
Strand 2	F	165	175	anti-parallel
Strand 3	F	151	154	anti-parallel
Strand 4	F	120	127	parallel
Strand 5	F	70	77	anti-parallel
Strand 6	F	80	88	anti-parallel
Strand 7	F	40	42	parallel
Strand 8	F	188	189	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	91	94	first strand
Strand 2	F	97	100	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	110	112	first strand
Strand 2	G	151	156	anti-parallel
Strand 3	G	142	146	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	106	112	first strand
Strand 2	V	71	78	anti-parallel
Strand 3	V	147	152	parallel
Strand 4	V	129	130	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	95	97	first strand
Strand 2	V	84	89	anti-parallel
Strand 3	V	116	121	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	43	45	first strand
Strand 2	P	73	78	anti-parallel
Strand 3	P	2	9	parallel
Strand 4	P	12	19	anti-parallel
Strand 5	Q	28	32	parallel
Strand 6	Q	18	22	anti-parallel
Strand 7	Q	60	61	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	554	555	first strand
Strand 2	R	31	32	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	561	565	first strand
Strand 2	O	574	578	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	593	594	first strand
Strand 2	O	638	640	anti-parallel
Strand 3	O	623	624	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	693	695	first strand
Strand 2	O	740	743	anti-parallel
Strand 3	O	731	733	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	70	72	first strand
Strand 2	R	78	80	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	12	16	first strand
Strand 2	N	2	6	anti-parallel
Strand 3	N	66	70	parallel
Strand 4	N	42	45	anti-parallel
Strand 5	N	48	49	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6R7F

Analysis of interatomic Contacts of Structural Units in PDB entry:
6R7F