Analysis of interatomic Contacts of Structural Units in PDB entry:
6R7T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6R7T entry

There are 2 chains in PDB entry 6R7T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1GLY 123
B
 ASP 108GLN 318
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6R7T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 32Right-handed 310
Helix 2
AA2
A
63 66Right-handed 310
Helix 3
AA3
A
88 92Right-handed 310
Helix 4
AA4
B
109 127Right-handed alpha
Helix 5
AA5
B
132 139Right-handed alpha
Helix 6
AA6
B
149 163Right-handed alpha
Helix 7
AA7
B
197 201Right-handed 310
Helix 8
AA8
B
202 213Right-handed alpha
Helix 9
AA9
B
219 229Right-handed alpha
Helix 10
AB1
B
242 249Right-handed alpha
Helix 11
AB2
B
249 254Right-handed alpha
Helix 12
AB3
B
275 282Right-handed alpha
Helix 13
AB4
B
283 294Right-handed alpha
Helix 14
AB5
B
298 301Right-handed 310
Helix 15
AB6
B
302 318Right-handed alpha
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There are 4 sheets in PDB entry 6R7T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 7first strand
Strand 2
A
18 25anti-parallel
Strand 3
A
79 84anti-parallel
Strand 4
A
69 74anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 12first strand
Strand 2
A
114 118parallel
Strand 3
A
93 100anti-parallel
Strand 4
A
34 39anti-parallel
Strand 5
A
45 51anti-parallel
Strand 6
A
59 61anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 12first strand
Strand 2
A
114 118parallel
Strand 3
A
93 100anti-parallel
Strand 4
A
107 110anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
217 218first strand
Strand 2
B
271 274anti-parallel
Strand 3
B
257 260anti-parallel
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