Analysis of interatomic Contacts of Structural Units in PDB entry:
6R7U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6R7U entry

There are 4 chains in PDB entry 6R7U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 21THR 22
A
 GLY 24PRO 327
B
 ARG 21THR 22
B
 GLY 24LEU 328
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6R7U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 36Right-handed alpha
Helix 2
AA2
A
36 50Right-handed alpha
Helix 3
AA3
A
80 95Right-handed alpha
Helix 4
AA4
A
99 105Right-handed 310
Helix 5
AA5
A
106 111Right-handed alpha
Helix 6
AA6
A
150 158Right-handed 310
Helix 7
AA7
A
186 190Right-handed 310
Helix 8
AA8
A
193 197Right-handed 310
Helix 9
AA9
A
204 206Right-handed 310
Helix 10
AB1
A
219 230Right-handed alpha
Helix 11
AB2
A
289 292Right-handed 310
Helix 12
AB3
A
297 306Right-handed alpha
Helix 13
AB4
A
314 319Right-handed 310
Helix 14
AB5
A
320 326Right-handed alpha
Helix 15
AB6
B
28 36Right-handed alpha
Helix 16
AB7
B
36 53Right-handed alpha
Helix 17
AB8
B
74 78Right-handed 310
Helix 18
AB9
B
80 95Right-handed alpha
Helix 19
AC1
B
99 105Right-handed 310
Helix 20
AC2
B
106 111Right-handed alpha
Helix 21
AC3
B
150 158Right-handed 310
Helix 22
AC4
B
186 190Right-handed 310
Helix 23
AC5
B
193 197Right-handed 310
Helix 24
AC6
B
204 206Right-handed 310
Helix 25
AC7
B
219 230Right-handed alpha
Helix 26
AC8
B
288 292Right-handed 310
Helix 27
AC9
B
296 306Right-handed alpha
Helix 28
AD1
B
315 326Right-handed alpha
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There are 6 sheets in PDB entry 6R7U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 122first strand
Strand 2
A
62 72parallel
Strand 3
A
135 139parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 122first strand
Strand 2
A
62 72parallel
Strand 3
A
169 174parallel
Strand 4
A
199 202parallel
Strand 5
A
182 184anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 114first strand
Strand 2
A
295 296anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
260 261first strand
Strand 2
A
286 287parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
118 122first strand
Strand 2
B
62 72parallel
Strand 3
B
135 139parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
118 122first strand
Strand 2
B
62 72parallel
Strand 3
B
169 174parallel
Strand 4
B
199 202parallel
Strand 5
B
182 184anti-parallel
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