Analysis of interatomic Contacts of Structural Units in PDB entry:
6R82


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6R82 entry

There are 2 chains in PDB entry 6R82 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 403ILE 587
B
 GLN 413ILE 587
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6R82. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
404 412Right-handed alpha
Helix 2
AA2
A
412 419Right-handed alpha
Helix 3
AA3
A
420 422Right-handed 310
Helix 4
AA4
A
423 429Right-handed 310
Helix 5
AA5
A
443 452Right-handed alpha
Helix 6
AA6
A
476 482Right-handed 310
Helix 7
AA7
A
522 526Right-handed 310
Helix 8
AA8
B
414 422Right-handed alpha
Helix 9
AA9
B
423 429Right-handed 310
Helix 10
AB1
B
443 452Right-handed alpha
Helix 11
AB2
B
476 482Right-handed 310
Helix 12
AB3
B
522 526Right-handed 310
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There are 4 sheets in PDB entry 6R82. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
430 436first strand
Strand 2
A
573 585anti-parallel
Strand 3
A
457 463anti-parallel
Strand 4
A
468 473anti-parallel
Strand 5
A
499 504anti-parallel
Strand 6
A
508 510anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
430 436first strand
Strand 2
A
573 585anti-parallel
Strand 3
A
554 556anti-parallel
Strand 4
A
546 549anti-parallel
Strand 5
A
535 538anti-parallel
Strand 6
A
529 531anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
430 436first strand
Strand 2
B
573 585anti-parallel
Strand 3
B
457 463anti-parallel
Strand 4
B
468 473anti-parallel
Strand 5
B
499 504anti-parallel
Strand 6
B
508 510anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
430 436first strand
Strand 2
B
573 585anti-parallel
Strand 3
B
554 557anti-parallel
Strand 4
B
546 549anti-parallel
Strand 5
B
535 538anti-parallel
Strand 6
B
529 531anti-parallel
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