Analysis of interatomic Contacts of Structural Units in PDB entry:
6R8X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6R8X entry

There are 3 chains in PDB entry 6R8X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 20GLN 243
B
 VAL 3THR 213
C
 GLN 1LYS 223
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6R8X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
55 59Right-handed 310
Helix 2
AA2
A
61 63Right-handed 310
Helix 3
AA3
A
73 77Right-handed 310
Helix 4
AA4
A
96 100Right-handed 310
Helix 5
AA5
A
126 130Right-handed 310
Helix 6
AA6
A
164 172Right-handed alpha
Helix 7
AA7
A
234 242Right-handed alpha
Helix 8
AA8
B
80 84Right-handed 310
Helix 9
AA9
B
125 131Right-handed alpha
Helix 10
AB1
B
185 192Right-handed alpha
Helix 11
AB2
C
28 32Right-handed 310
Helix 12
AB3
C
62 65Right-handed 310
Helix 13
AB4
C
87 91Right-handed 310
Helix 14
AB5
C
165 167Right-handed 310
Helix 15
AB6
C
196 198Right-handed 310
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There are 14 sheets in PDB entry 6R8X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 68first strand
Strand 2
A
30 35anti-parallel
Strand 3
A
37 46anti-parallel
Strand 4
A
51 54anti-parallel
Strand 5
A
104 108anti-parallel
Strand 6
A
85 90anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 159first strand
Strand 2
A
136 140anti-parallel
Strand 3
A
198 202anti-parallel
Strand 4
A
202 216anti-parallel
Strand 5
A
226 230anti-parallel
Strand 6
A
180 183anti-parallel
Strand 7
A
162 163anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 12first strand
Strand 2
B
105 109parallel
Strand 3
B
86 93anti-parallel
Strand 4
B
34 39anti-parallel
Strand 5
B
46 49anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 12first strand
Strand 2
B
105 109parallel
Strand 3
B
86 93anti-parallel
Strand 4
B
98 101anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 23first strand
Strand 2
B
71 76anti-parallel
Strand 3
B
63 68anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
118 122first strand
Strand 2
B
134 143anti-parallel
Strand 3
B
176 184anti-parallel
Strand 4
B
163 165anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
118 122first strand
Strand 2
B
134 143anti-parallel
Strand 3
B
176 184anti-parallel
Strand 4
B
169 170anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
157 159first strand
Strand 2
B
149 154anti-parallel
Strand 3
B
195 201anti-parallel
Strand 4
B
204 210anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 7first strand
Strand 2
C
18 25anti-parallel
Strand 3
C
78 83anti-parallel
Strand 4
C
68 73anti-parallel
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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 12first strand
Strand 2
C
116 120parallel
Strand 3
C
92 100anti-parallel
Strand 4
C
33 39anti-parallel
Strand 5
C
45 51anti-parallel
Strand 6
C
58 60anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 12first strand
Strand 2
C
116 120parallel
Strand 3
C
92 100anti-parallel
Strand 4
C
108 112anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
129 133first strand
Strand 2
C
144 154anti-parallel
Strand 3
C
185 194anti-parallel
Strand 4
C
172 174anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
129 133first strand
Strand 2
C
144 154anti-parallel
Strand 3
C
185 194anti-parallel
Strand 4
C
178 179anti-parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
160 163first strand
Strand 2
C
204 209anti-parallel
Strand 3
C
214 219anti-parallel
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