Analysis of interatomic Contacts of Structural Units in PDB entry:
6R9B

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6R9B entry

There are 7 chains in PDB entry 6R9B (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 5	VAL 237
B	THR 6	ARG 238
C	MET 1	ASP 1341
D	GLU 15	GLY 1376
E	ALA 2	GLN 75
F	MET 5	VAL 108
G	MET 5	GLU 109

There are110 helices in PDB entry 6R9B. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	35	50	Right-handed alpha
Helix 2	AA2	A	77	87	Right-handed alpha
Helix 3	AA3	A	111	115	Right-handed 310
Helix 4	AA4	A	154	160	Right-handed alpha
Helix 5	AA5	A	212	227	Right-handed alpha
Helix 6	AA6	B	35	48	Right-handed alpha
Helix 7	AA7	B	79	88	Right-handed alpha
Helix 8	AA8	B	111	115	Right-handed 310
Helix 9	AA9	B	212	228	Right-handed alpha
Helix 10	AB1	C	4	9	Right-handed alpha
Helix 11	AB2	C	28	39	Right-handed alpha
Helix 12	AB3	C	49	57	Right-handed alpha
Helix 13	AB4	C	83	87	Right-handed 310
Helix 14	AB5	C	198	201	Right-handed 310
Helix 15	AB6	C	206	211	Right-handed alpha
Helix 16	AB7	C	212	214	Right-handed 310
Helix 17	AB8	C	216	224	Right-handed alpha
Helix 18	AB9	C	270	280	Right-handed alpha
Helix 19	AC1	C	289	294	Right-handed alpha
Helix 20	AC2	C	320	329	Right-handed alpha
Helix 21	AC3	C	348	354	Right-handed alpha
Helix 22	AC4	C	358	371	Right-handed alpha
Helix 23	AC5	C	379	390	Right-handed alpha
Helix 24	AC6	C	398	409	Right-handed alpha
Helix 25	AC7	C	421	438	Right-handed alpha
Helix 26	AC8	C	455	482	Right-handed alpha
Helix 27	AC9	C	495	508	Right-handed alpha
Helix 28	AD1	C	519	526	Right-handed alpha
Helix 29	AD2	C	544	549	Right-handed alpha
Helix 30	AD3	C	607	614	Right-handed alpha
Helix 31	AD4	C	670	674	Right-handed 310
Helix 32	AD5	C	675	685	Right-handed alpha
Helix 33	AD6	C	704	711	Right-handed alpha
Helix 34	AD7	C	789	793	Right-handed 310
Helix 35	AD8	C	819	826	Right-handed alpha
Helix 36	AD9	C	858	865	Right-handed alpha
Helix 37	AE1	C	896	898	Right-handed 310
Helix 38	AE2	C	899	906	Right-handed alpha
Helix 39	AE3	C	945	979	Right-handed alpha
Helix 40	AE4	C	994	1000	Right-handed alpha
Helix 41	AE5	C	1005	1039	Right-handed alpha
Helix 42	AE6	C	1102	1107	Right-handed alpha
Helix 43	AE7	C	1108	1134	Right-handed alpha
Helix 44	AE8	C	1137	1150	Right-handed alpha
Helix 45	AE9	C	1169	1176	Right-handed alpha
Helix 46	AF1	C	1192	1202	Right-handed alpha
Helix 47	AF2	C	1238	1242	Right-handed 310
Helix 48	AF3	C	1271	1281	Right-handed alpha
Helix 49	AF4	C	1284	1291	Right-handed alpha
Helix 50	AF5	C	1297	1311	Right-handed alpha
Helix 51	AF6	C	1322	1331	Right-handed alpha
Helix 52	AF7	D	26	33	Right-handed alpha
Helix 53	AF8	D	113	118	Right-handed alpha
Helix 54	AF9	D	122	128	Right-handed alpha
Helix 55	AG1	D	131	137	Right-handed alpha
Helix 56	AG2	D	161	173	Right-handed alpha
Helix 57	AG3	D	182	190	Right-handed alpha
Helix 58	AG4	D	196	208	Right-handed alpha
Helix 59	AG5	D	210	215	Right-handed alpha
Helix 60	AG6	D	217	229	Right-handed alpha
Helix 61	AG7	D	233	238	Right-handed 310
Helix 62	AG8	D	265	285	Right-handed alpha
Helix 63	AG9	D	288	308	Right-handed alpha
Helix 64	AH1	D	370	374	Right-handed alpha
Helix 65	AH2	D	377	388	Right-handed alpha
Helix 66	AH3	D	393	402	Right-handed alpha
Helix 67	AH4	D	405	418	Right-handed alpha
Helix 68	AH5	D	473	483	Right-handed alpha
Helix 69	AH6	D	505	513	Right-handed alpha
Helix 70	AH7	D	530	539	Right-handed alpha
Helix 71	AH8	D	573	583	Right-handed alpha
Helix 72	AH9	D	597	613	Right-handed alpha
Helix 73	AI1	D	614	636	Right-handed alpha
Helix 74	AI2	D	649	671	Right-handed alpha
Helix 75	AI3	D	674	700	Right-handed alpha
Helix 76	AI4	D	720	729	Right-handed alpha
Helix 77	AI5	D	733	741	Right-handed alpha
Helix 78	AI6	D	768	787	Right-handed alpha
Helix 79	AI7	D	788	803	Right-handed alpha
Helix 80	AI8	D	835	840	Right-handed alpha
Helix 81	AI9	D	865	875	Right-handed alpha
Helix 82	AJ1	D	888	892	Right-handed 310
Helix 83	AJ2	D	914	922	Right-handed alpha
Helix 84	AJ3	D	931	936	Right-handed alpha
Helix 85	AJ4	D	1063	1068	Right-handed alpha
Helix 86	AJ5	D	1134	1138	Right-handed alpha
Helix 87	AJ6	D	1141	1146	Right-handed alpha
Helix 88	AJ7	D	1216	1224	Right-handed alpha
Helix 89	AJ8	D	1225	1245	Right-handed alpha
Helix 90	AJ9	D	1249	1260	Right-handed alpha
Helix 91	AK1	D	1279	1286	Right-handed alpha
Helix 92	AK2	D	1286	1294	Right-handed alpha
Helix 93	AK3	D	1308	1315	Right-handed alpha
Helix 94	AK4	D	1327	1339	Right-handed alpha
Helix 95	AK5	D	1346	1353	Right-handed alpha
Helix 96	AK6	D	1362	1371	Right-handed alpha
Helix 97	AK7	E	6	13	Right-handed alpha
Helix 98	AK8	E	17	33	Right-handed alpha
Helix 99	AK9	E	45	57	Right-handed alpha
Helix 100	AL1	E	60	75	Right-handed alpha
Helix 101	AL2	F	6	26	Right-handed alpha
Helix 102	AL3	F	29	43	Right-handed alpha
Helix 103	AL4	F	48	58	Right-handed alpha
Helix 104	AL5	F	76	96	Right-handed alpha
Helix 105	AL6	F	97	108	Right-handed alpha
Helix 106	AL7	G	6	26	Right-handed alpha
Helix 107	AL8	G	33	43	Right-handed alpha
Helix 108	AL9	G	49	58	Right-handed alpha
Helix 109	AM1	G	67	71	Right-handed 310
Helix 110	AM2	G	76	108	Right-handed alpha

There are 29 sheets in PDB entry 6R9B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	13	14	first strand
Strand 2	A	26	28	anti-parallel
Strand 3	A	199	205	anti-parallel
Strand 4	A	183	189	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	100	first strand
Strand 2	A	142	149	anti-parallel
Strand 3	A	53	61	anti-parallel
Strand 4	A	170	172	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	92	first strand
Strand 2	A	121	122	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	25	28	first strand
Strand 2	B	200	207	anti-parallel
Strand 3	B	180	188	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	61	first strand
Strand 2	B	142	146	anti-parallel
Strand 3	B	98	100	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	66	70	first strand
Strand 2	C	100	104	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	451	454	first strand
Strand 2	C	147	151	anti-parallel
Strand 3	C	529	531	parallel
Strand 4	C	572	574	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	154	156	first strand
Strand 2	C	174	177	anti-parallel
Strand 3	C	184	187	anti-parallel
Strand 4	C	195	196	anti-parallel
Strand 5	C	204	205	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	228	231	first strand
Strand 2	C	332	335	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	256	257	first strand
Strand 2	C	260	261	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	580	581	first strand
Strand 2	C	587	588	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	604	605	first strand
Strand 2	C	590	593	anti-parallel
Strand 3	C	652	653	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	616	617	first strand
Strand 2	C	634	637	anti-parallel
Strand 3	C	644	645	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	724	728	first strand
Strand 2	C	731	734	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	757	758	first strand
Strand 2	C	764	765	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	768	769	first strand
Strand 2	C	784	785	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1209	1210	first strand
Strand 2	C	1225	1234	anti-parallel
Strand 3	C	1065	1068	anti-parallel
Strand 4	C	1073	1079	anti-parallel
Strand 5	C	816	818	parallel
Strand 6	C	1096	1098	anti-parallel
Strand 7	C	798	804	parallel
Strand 8	C	1225	1234	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	831	835	first strand
Strand 2	C	1052	1057	anti-parallel
Strand 3	C	927	931	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	838	839	first strand
Strand 2	C	1049	1050	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	882	884	first strand
Strand 2	C	918	919	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1244	1246	first strand
Strand 2	D	350	354	anti-parallel
Strand 3	D	465	469	anti-parallel
Strand 4	D	421	425	anti-parallel
Strand 5	D	435	437	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	103	106	first strand
Strand 2	D	241	244	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	368	369	first strand
Strand 2	D	441	442	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	548	552	first strand
Strand 2	D	568	572	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	843	844	first strand
Strand 2	D	882	883	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	950	951	first strand
Strand 2	D	1016	1018	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	956	957	first strand
Strand 2	D	1010	1011	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	965	967	first strand
Strand 2	D	973	975	anti-parallel
Strand 3	D	1001	1003	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1264	1265	first strand
Strand 2	D	1277	1278	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6R9B

Analysis of interatomic Contacts of Structural Units in PDB entry:
6R9B