Analysis of interatomic Contacts of Structural Units in PDB entry:
6R9G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6R9G entry

There are 7 chains in PDB entry 6R9G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 6	ARG 235
B	VAL 5	ARG 235
C	MET 1	ASP 1341
D	THR 14	GLY 1376
E	MET 1	GLN 75
G	MET 5	VAL 108
F	MET 5	GLU 110

There are102 helices in PDB entry 6R9G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	36	48	Right-handed alpha
Helix 2	AA2	A	77	87	Right-handed alpha
Helix 3	AA3	A	111	115	Right-handed 310
Helix 4	AA4	A	212	226	Right-handed alpha
Helix 5	AA5	B	35	50	Right-handed alpha
Helix 6	AA6	B	70	74	Right-handed 310
Helix 7	AA7	B	77	85	Right-handed alpha
Helix 8	AA8	B	111	115	Right-handed 310
Helix 9	AA9	B	212	228	Right-handed alpha
Helix 10	AB1	B	229	232	Right-handed 310
Helix 11	AB2	C	28	39	Right-handed alpha
Helix 12	AB3	C	48	54	Right-handed alpha
Helix 13	AB4	C	81	89	Right-handed alpha
Helix 14	AB5	C	216	225	Right-handed alpha
Helix 15	AB6	C	270	280	Right-handed alpha
Helix 16	AB7	C	289	294	Right-handed alpha
Helix 17	AB8	C	318	329	Right-handed alpha
Helix 18	AB9	C	346	354	Right-handed alpha
Helix 19	AC1	C	358	371	Right-handed alpha
Helix 20	AC2	C	379	389	Right-handed alpha
Helix 21	AC3	C	398	409	Right-handed alpha
Helix 22	AC4	C	421	438	Right-handed alpha
Helix 23	AC5	C	455	480	Right-handed alpha
Helix 24	AC6	C	495	507	Right-handed alpha
Helix 25	AC7	C	520	527	Right-handed alpha
Helix 26	AC8	C	607	612	Right-handed alpha
Helix 27	AC9	C	675	687	Right-handed alpha
Helix 28	AD1	C	703	712	Right-handed alpha
Helix 29	AD2	C	820	825	Right-handed alpha
Helix 30	AD3	C	858	863	Right-handed alpha
Helix 31	AD4	C	899	907	Right-handed alpha
Helix 32	AD5	C	941	979	Right-handed alpha
Helix 33	AD6	C	985	992	Right-handed alpha
Helix 34	AD7	C	992	1000	Right-handed alpha
Helix 35	AD8	C	1003	1037	Right-handed alpha
Helix 36	AD9	C	1099	1101	Right-handed 310
Helix 37	AE1	C	1102	1107	Right-handed alpha
Helix 38	AE2	C	1108	1134	Right-handed alpha
Helix 39	AE3	C	1137	1151	Right-handed alpha
Helix 40	AE4	C	1168	1176	Right-handed alpha
Helix 41	AE5	C	1177	1179	Right-handed 310
Helix 42	AE6	C	1191	1200	Right-handed alpha
Helix 43	AE7	C	1201	1203	Right-handed 310
Helix 44	AE8	C	1273	1282	Right-handed alpha
Helix 45	AE9	C	1284	1292	Right-handed alpha
Helix 46	AF1	C	1298	1310	Right-handed alpha
Helix 47	AF2	C	1322	1331	Right-handed alpha
Helix 48	AF3	D	26	34	Right-handed alpha
Helix 49	AF4	D	113	118	Right-handed alpha
Helix 50	AF5	D	131	139	Right-handed alpha
Helix 51	AF6	D	161	173	Right-handed alpha
Helix 52	AF7	D	182	192	Right-handed alpha
Helix 53	AF8	D	193	208	Right-handed alpha
Helix 54	AF9	D	210	231	Right-handed alpha
Helix 55	AG1	D	233	236	Right-handed 310
Helix 56	AG2	D	246	250	Right-handed 310
Helix 57	AG3	D	264	285	Right-handed alpha
Helix 58	AG4	D	288	308	Right-handed alpha
Helix 59	AG5	D	326	333	Right-handed alpha
Helix 60	AG6	D	370	377	Right-handed alpha
Helix 61	AG7	D	377	388	Right-handed alpha
Helix 62	AG8	D	393	404	Right-handed alpha
Helix 63	AG9	D	405	417	Right-handed alpha
Helix 64	AH1	D	430	432	Right-handed 310
Helix 65	AH2	D	473	483	Right-handed alpha
Helix 66	AH3	D	505	514	Right-handed alpha
Helix 67	AH4	D	532	539	Right-handed alpha
Helix 68	AH5	D	573	583	Right-handed alpha
Helix 69	AH6	D	588	592	Right-handed 310
Helix 70	AH7	D	597	613	Right-handed alpha
Helix 71	AH8	D	614	636	Right-handed alpha
Helix 72	AH9	D	649	669	Right-handed alpha
Helix 73	AI1	D	674	701	Right-handed alpha
Helix 74	AI2	D	720	729	Right-handed alpha
Helix 75	AI3	D	733	741	Right-handed alpha
Helix 76	AI4	D	768	784	Right-handed alpha
Helix 77	AI5	D	789	804	Right-handed alpha
Helix 78	AI6	D	834	840	Right-handed alpha
Helix 79	AI7	D	865	875	Right-handed alpha
Helix 80	AI8	D	916	925	Right-handed alpha
Helix 81	AI9	D	1137	1147	Right-handed alpha
Helix 82	AJ1	D	1216	1224	Right-handed alpha
Helix 83	AJ2	D	1225	1242	Right-handed alpha
Helix 84	AJ3	D	1249	1260	Right-handed alpha
Helix 85	AJ4	D	1279	1293	Right-handed alpha
Helix 86	AJ5	D	1318	1322	Right-handed 310
Helix 87	AJ6	D	1327	1339	Right-handed alpha
Helix 88	AJ7	D	1348	1353	Right-handed alpha
Helix 89	AJ8	D	1360	1375	Right-handed alpha
Helix 90	AJ9	E	6	11	Right-handed alpha
Helix 91	AK1	E	17	33	Right-handed alpha
Helix 92	AK2	E	45	56	Right-handed alpha
Helix 93	AK3	E	60	75	Right-handed alpha
Helix 94	AK4	G	6	26	Right-handed alpha
Helix 95	AK5	G	30	32	Right-handed 310
Helix 96	AK6	G	33	43	Right-handed alpha
Helix 97	AK7	G	48	57	Right-handed alpha
Helix 98	AK8	G	77	108	Right-handed alpha
Helix 99	AK9	F	6	26	Right-handed alpha
Helix 100	AL1	F	34	44	Right-handed alpha
Helix 101	AL2	F	48	56	Right-handed alpha
Helix 102	AL3	F	76	105	Right-handed alpha

There are 28 sheets in PDB entry 6R9G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	14	17	first strand
Strand 2	A	23	31	anti-parallel
Strand 3	A	199	206	anti-parallel
Strand 4	A	182	188	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	99	101	first strand
Strand 2	A	142	149	anti-parallel
Strand 3	A	53	61	anti-parallel
Strand 4	A	170	172	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	91	first strand
Strand 2	A	122	123	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	17	18	first strand
Strand 2	B	24	26	anti-parallel
Strand 3	B	198	207	anti-parallel
Strand 4	B	180	190	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	60	first strand
Strand 2	B	139	150	anti-parallel
Strand 3	B	97	105	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	14	first strand
Strand 2	C	1182	1183	parallel
Strand 3	C	700	701	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	69	first strand
Strand 2	C	101	104	anti-parallel
Strand 3	C	115	118	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	94	98	first strand
Strand 2	C	122	127	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	136	138	first strand
Strand 2	C	141	145	anti-parallel
Strand 3	C	512	514	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	451	454	first strand
Strand 2	C	147	151	anti-parallel
Strand 3	C	530	531	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	184	188	first strand
Strand 2	C	194	198	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	285	286	first strand
Strand 2	C	238	239	anti-parallel
Strand 3	C	230	231	anti-parallel
Strand 4	C	332	333	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	255	257	first strand
Strand 2	C	260	263	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	580	581	first strand
Strand 2	C	587	594	anti-parallel
Strand 3	C	599	606	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	580	581	first strand
Strand 2	C	587	594	anti-parallel
Strand 3	C	652	654	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	616	617	first strand
Strand 2	C	635	637	anti-parallel
Strand 3	C	642	644	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	724	727	first strand
Strand 2	C	731	735	anti-parallel
Strand 3	C	748	752	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	768	769	first strand
Strand 2	C	784	785	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	817	818	first strand
Strand 2	C	1096	1098	anti-parallel
Strand 3	C	798	804	parallel
Strand 4	C	1228	1234	anti-parallel
Strand 5	C	1066	1067	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	830	837	first strand
Strand 2	C	1051	1058	anti-parallel
Strand 3	C	926	931	anti-parallel
Strand 4	C	876	877	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	105	112	first strand
Strand 2	D	238	242	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	355	357	first strand
Strand 2	D	447	449	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	366	369	first strand
Strand 2	D	439	442	parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	434	437	first strand
Strand 2	D	421	424	anti-parallel
Strand 3	D	467	469	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	548	556	first strand
Strand 2	D	564	572	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	821	822	first strand
Strand 2	D	880	881	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	958	961	first strand
Strand 2	D	981	984	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1264	1265	first strand
Strand 2	D	1277	1278	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6R9G

Analysis of interatomic Contacts of Structural Units in PDB entry:
6R9G