Analysis of interatomic Contacts of Structural Units in PDB entry:
6R9M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6R9M entry

There are 2 chains in PDB entry 6R9M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 461PRO 1110
B
 G 3 A 6
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6R9M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
476 480Right-handed 310
Helix 2
AA2
A
516 525Right-handed alpha
Helix 3
AA3
A
526 536Right-handed alpha
Helix 4
AA4
A
544 561Right-handed alpha
Helix 5
AA5
A
567 579Right-handed alpha
Helix 6
AA6
A
591 601Right-handed alpha
Helix 7
AA7
A
617 636Right-handed alpha
Helix 8
AA8
A
642 649Right-handed alpha
Helix 9
AA9
A
695 703Right-handed alpha
Helix 10
AB1
A
742 750Right-handed alpha
Helix 11
AB2
A
833 839Right-handed alpha
Helix 12
AB3
A
855 859Right-handed alpha
Helix 13
AB4
A
864 868Right-handed 310
Helix 14
AB5
A
872 877Right-handed alpha
Helix 15
AB6
A
896 900Right-handed 310
Helix 16
AB7
A
972 977Right-handed alpha
Helix 17
AB8
A
994 1009Right-handed alpha
Helix 18
AB9
A
1017 1025Right-handed alpha
Helix 19
AC1
A
1029 1031Right-handed 310
Helix 20
AC2
A
1036 1040Right-handed alpha
Helix 21
AC3
A
1048 1056Right-handed alpha
Helix 22
AC4
A
1067 1088Right-handed alpha
Helix 23
AC5
A
1092 1106Right-handed alpha
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There are 4 sheets in PDB entry 6R9M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
662 670first strand
Strand 2
A
650 659anti-parallel
Strand 3
A
724 728anti-parallel
Strand 4
A
704 707anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
675 676first strand
Strand 2
A
734 740parallel
Strand 3
A
845 854anti-parallel
Strand 4
A
785 797anti-parallel
Strand 5
A
759 763anti-parallel
Strand 6
A
770 772anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
675 676first strand
Strand 2
A
734 740parallel
Strand 3
A
845 854anti-parallel
Strand 4
A
785 797anti-parallel
Strand 5
A
803 812anti-parallel
Strand 6
A
819 824anti-parallel
Strand 7
A
829 832anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
992 993first strand
Strand 2
A
956 962parallel
Strand 3
A
938 946anti-parallel
Strand 4
A
906 914anti-parallel
Strand 5
A
1011 1014parallel
Strand 6
A
1033 1035parallel
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