Analysis of interatomic Contacts of Structural Units in PDB entry:
6R9P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6R9P entry

There are 2 chains in PDB entry 6R9P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 461GLU 1111
B
 U 3 A 6
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6R9P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
476 480Right-handed 310
Helix 2
AA2
A
515 525Right-handed alpha
Helix 3
AA3
A
526 536Right-handed alpha
Helix 4
AA4
A
544 561Right-handed alpha
Helix 5
AA5
A
567 579Right-handed alpha
Helix 6
AA6
A
589 596Right-handed alpha
Helix 7
AA7
A
617 635Right-handed alpha
Helix 8
AA8
A
644 649Right-handed alpha
Helix 9
AA9
A
695 703Right-handed alpha
Helix 10
AB1
A
742 752Right-handed alpha
Helix 11
AB2
A
833 839Right-handed alpha
Helix 12
AB3
A
855 859Right-handed alpha
Helix 13
AB4
A
872 876Right-handed 310
Helix 14
AB5
A
994 1009Right-handed alpha
Helix 15
AB6
A
1016 1024Right-handed alpha
Helix 16
AB7
A
1029 1031Right-handed 310
Helix 17
AB8
A
1036 1040Right-handed alpha
Helix 18
AB9
A
1049 1056Right-handed alpha
Helix 19
AC1
A
1067 1088Right-handed alpha
Helix 20
AC2
A
1090 1102Right-handed alpha
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There are 4 sheets in PDB entry 6R9P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
662 670first strand
Strand 2
A
650 659anti-parallel
Strand 3
A
723 728anti-parallel
Strand 4
A
704 707anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
672 676first strand
Strand 2
A
734 740parallel
Strand 3
A
845 854anti-parallel
Strand 4
A
785 797anti-parallel
Strand 5
A
759 763anti-parallel
Strand 6
A
770 772anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
672 676first strand
Strand 2
A
734 740parallel
Strand 3
A
845 854anti-parallel
Strand 4
A
785 797anti-parallel
Strand 5
A
803 812anti-parallel
Strand 6
A
819 824anti-parallel
Strand 7
A
829 832anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
992 993first strand
Strand 2
A
956 962parallel
Strand 3
A
937 945anti-parallel
Strand 4
A
906 915anti-parallel
Strand 5
A
1011 1014parallel
Strand 6
A
1033 1035parallel
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