Analysis of interatomic Contacts of Structural Units in PDB entry:
6R9V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6R9V entry

There is 1 chain in PDB entry 6R9V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TYR 369
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 6R9V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 30Right-handed alpha
Helix 2
AA2
A
33 42Right-handed alpha
Helix 3
AA3
A
47 56Right-handed alpha
Helix 4
AA4
A
57 60Right-handed 310
Helix 5
AA5
A
95 99Right-handed 310
Helix 6
AA6
A
103 115Right-handed alpha
Helix 7
AA7
A
127 136Right-handed alpha
Helix 8
AA8
A
149 163Right-handed alpha
Helix 9
AA9
A
180 187Right-handed alpha
Helix 10
AB1
A
194 203Right-handed alpha
Helix 11
AB2
A
209 216Right-handed alpha
Helix 12
AB3
A
222 234Right-handed alpha
Helix 13
AB4
A
244 254Right-handed alpha
Helix 14
AB5
A
263 267Right-handed 310
Helix 15
AB6
A
275 287Right-handed alpha
Helix 16
AB7
A
300 310Right-handed alpha
Helix 17
AB8
A
318 352Right-handed alpha
Helix 18
AB9
A
355 361Right-handed alpha
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There are 3 sheets in PDB entry 6R9V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 4first strand
Strand 2
A
7 9anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 79first strand
Strand 2
A
82 84anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 90first strand
Strand 2
A
314 317parallel
Strand 3
A
292 294parallel
Strand 4
A
258 261parallel
Strand 5
A
237 242parallel
Strand 6
A
168 171parallel
Strand 7
A
140 144parallel
Strand 8
A
118 121parallel
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