Analysis of interatomic Contacts of Structural Units in PDB entry:
6RAB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6RAB entry

There are 2 chains in PDB entry 6RAB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 5LEU 305
B
 GLU 5LEU 305
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 6RAB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 40Right-handed alpha
Helix 2
AA2
A
48 56Right-handed 310
Helix 3
AA3
A
57 72Right-handed alpha
Helix 4
AA4
A
86 100Right-handed alpha
Helix 5
AA5
A
116 131Right-handed alpha
Helix 6
AA6
A
141 146Right-handed alpha
Helix 7
AA7
A
150 159Right-handed alpha
Helix 8
AA8
A
172 184Right-handed alpha
Helix 9
AA9
A
193 195Right-handed 310
Helix 10
AB1
A
196 203Right-handed alpha
Helix 11
AB2
A
212 215Right-handed 310
Helix 12
AB3
A
216 230Right-handed alpha
Helix 13
AB4
A
231 251Right-handed alpha
Helix 14
AB5
A
255 269Right-handed alpha
Helix 15
AB6
A
283 285Right-handed 310
Helix 16
AB7
A
286 305Right-handed alpha
Helix 17
AB8
B
25 40Right-handed alpha
Helix 18
AB9
B
48 56Right-handed 310
Helix 19
AC1
B
57 72Right-handed alpha
Helix 20
AC2
B
86 100Right-handed alpha
Helix 21
AC3
B
116 131Right-handed alpha
Helix 22
AC4
B
141 146Right-handed alpha
Helix 23
AC5
B
150 158Right-handed alpha
Helix 24
AC6
B
172 184Right-handed alpha
Helix 25
AC7
B
193 195Right-handed 310
Helix 26
AC8
B
196 204Right-handed alpha
Helix 27
AC9
B
212 215Right-handed 310
Helix 28
AD1
B
216 230Right-handed alpha
Helix 29
AD2
B
231 251Right-handed alpha
Helix 30
AD3
B
255 269Right-handed alpha
Helix 31
AD4
B
283 285Right-handed 310
Helix 32
AD5
B
286 305Right-handed alpha
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There are 2 sheets in PDB entry 6RAB. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 12first strand
Strand 2
A
207 210parallel
Strand 3
A
188 191parallel
Strand 4
A
163 168parallel
Strand 5
A
135 140parallel
Strand 6
A
104 106parallel
Strand 7
A
77 81parallel
Strand 8
A
43 46parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 12first strand
Strand 2
B
207 210parallel
Strand 3
B
188 191parallel
Strand 4
B
163 168parallel
Strand 5
B
135 140parallel
Strand 6
B
104 106parallel
Strand 7
B
77 81parallel
Strand 8
B
43 46parallel
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