Analysis of interatomic Contacts of Structural Units in PDB entry:
6RAW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6RAW entry

There are 13 chains in PDB entry 6RAW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
2	LEU 174	TYR 798
3	GLU 4	GLN 644
4	VAL 153	THR 776
5	ILE 25	MET 652
6	VAL 13	GLN 653
7	ARG 3	GLN 646
F	A -11	T 14
G	T 6	T 18
A	LEU 6	VAL 572
H	MET 7	ILE 201
L	MET 1	GLN 171
M	PRO 8	THR 174
N	GLY 21	ILE 228

There are171 helices in PDB entry 6RAW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	2	175	177	Right-handed 310
Helix 2	AA2	2	178	186	Right-handed alpha
Helix 3	AA3	2	198	211	Right-handed alpha
Helix 4	AA4	2	218	226	Right-handed alpha
Helix 5	AA5	2	236	256	Right-handed alpha
Helix 6	AA6	2	257	260	Right-handed 310
Helix 7	AA7	2	283	287	Right-handed 310
Helix 8	AA8	2	448	453	Right-handed alpha
Helix 9	AA9	2	456	463	Right-handed 310
Helix 10	AB1	2	473	486	Right-handed alpha
Helix 11	AB2	2	516	525	Right-handed alpha
Helix 12	AB3	2	560	564	Right-handed 310
Helix 13	AB4	2	573	577	Right-handed 310
Helix 14	AB5	2	578	583	Right-handed alpha
Helix 15	AB6	2	587	592	Right-handed alpha
Helix 16	AB7	2	635	640	Right-handed alpha
Helix 17	AB8	2	653	668	Right-handed alpha
Helix 18	AB9	2	693	707	Right-handed alpha
Helix 19	AC1	2	718	731	Right-handed alpha
Helix 20	AC2	2	741	744	Right-handed 310
Helix 21	AC3	2	745	758	Right-handed alpha
Helix 22	AC4	2	764	782	Right-handed alpha
Helix 23	AC5	2	788	795	Right-handed alpha
Helix 24	AC6	3	7	18	Right-handed alpha
Helix 25	AC7	3	47	53	Right-handed alpha
Helix 26	AC8	3	55	60	Right-handed alpha
Helix 27	AC9	3	68	85	Right-handed alpha
Helix 28	AD1	3	86	89	Right-handed 310
Helix 29	AD2	3	109	113	Right-handed 310
Helix 30	AD3	3	201	205	Right-handed 310
Helix 31	AD4	3	219	223	Right-handed 310
Helix 32	AD5	3	276	285	Right-handed alpha
Helix 33	AD6	3	290	299	Right-handed alpha
Helix 34	AD7	3	309	316	Right-handed alpha
Helix 35	AD8	3	350	355	Right-handed alpha
Helix 36	AD9	3	393	397	Right-handed 310
Helix 37	AE1	3	413	423	Right-handed alpha
Helix 38	AE2	3	469	474	Right-handed alpha
Helix 39	AE3	3	488	500	Right-handed alpha
Helix 40	AE4	3	559	565	Right-handed alpha
Helix 41	AE5	3	566	572	Right-handed alpha
Helix 42	AE6	3	580	595	Right-handed alpha
Helix 43	AE7	3	610	623	Right-handed alpha
Helix 44	AE8	3	632	641	Right-handed alpha
Helix 45	AE9	4	160	174	Right-handed alpha
Helix 46	AF1	4	177	182	Right-handed alpha
Helix 47	AF2	4	194	205	Right-handed alpha
Helix 48	AF3	4	216	220	Right-handed 310
Helix 49	AF4	4	223	231	Right-handed alpha
Helix 50	AF5	4	232	252	Right-handed alpha
Helix 51	AF6	4	378	382	Right-handed 310
Helix 52	AF7	4	445	456	Right-handed alpha
Helix 53	AF8	4	459	468	Right-handed alpha
Helix 54	AF9	4	475	487	Right-handed alpha
Helix 55	AG1	4	517	527	Right-handed alpha
Helix 56	AG2	4	564	569	Right-handed 310
Helix 57	AG3	4	588	596	Right-handed alpha
Helix 58	AG4	4	657	659	Right-handed 310
Helix 59	AG5	4	660	675	Right-handed alpha
Helix 60	AG6	4	687	695	Right-handed alpha
Helix 61	AG7	4	696	698	Right-handed 310
Helix 62	AG8	4	709	720	Right-handed alpha
Helix 63	AG9	4	734	749	Right-handed alpha
Helix 64	AH1	4	757	769	Right-handed alpha
Helix 65	AH2	5	26	32	Right-handed alpha
Helix 66	AH3	5	32	41	Right-handed alpha
Helix 67	AH4	5	50	59	Right-handed alpha
Helix 68	AH5	5	71	75	Right-handed 310
Helix 69	AH6	5	78	84	Right-handed alpha
Helix 70	AH7	5	86	107	Right-handed alpha
Helix 71	AH8	5	131	135	Right-handed 310
Helix 72	AH9	5	312	324	Right-handed alpha
Helix 73	AI1	5	328	333	Right-handed alpha
Helix 74	AI2	5	343	348	Right-handed alpha
Helix 75	AI3	5	351	356	Right-handed alpha
Helix 76	AI4	5	383	394	Right-handed alpha
Helix 77	AI5	5	448	451	Right-handed 310
Helix 78	AI6	5	452	462	Right-handed alpha
Helix 79	AI7	5	490	496	Right-handed alpha
Helix 80	AI8	5	522	537	Right-handed alpha
Helix 81	AI9	5	554	566	Right-handed alpha
Helix 82	AJ1	5	575	598	Right-handed alpha
Helix 83	AJ2	5	608	627	Right-handed alpha
Helix 84	AJ3	5	636	650	Right-handed alpha
Helix 85	AJ4	6	15	31	Right-handed alpha
Helix 86	AJ5	6	41	48	Right-handed alpha
Helix 87	AJ6	6	59	65	Right-handed alpha
Helix 88	AJ7	6	69	74	Right-handed alpha
Helix 89	AJ8	6	76	93	Right-handed alpha
Helix 90	AJ9	6	325	333	Right-handed alpha
Helix 91	AK1	6	337	344	Right-handed alpha
Helix 92	AK2	6	360	365	Right-handed alpha
Helix 93	AK3	6	395	400	Right-handed alpha
Helix 94	AK4	6	400	405	Right-handed alpha
Helix 95	AK5	6	440	444	Right-handed 310
Helix 96	AK6	6	460	469	Right-handed alpha
Helix 97	AK7	6	507	513	Right-handed alpha
Helix 98	AK8	6	517	522	Right-handed alpha
Helix 99	AK9	6	533	545	Right-handed alpha
Helix 100	AL1	6	560	572	Right-handed alpha
Helix 101	AL2	6	580	597	Right-handed alpha
Helix 102	AL3	6	610	626	Right-handed alpha
Helix 103	AL4	6	635	652	Right-handed alpha
Helix 104	AL5	7	7	19	Right-handed alpha
Helix 105	AL6	7	31	42	Right-handed alpha
Helix 106	AL7	7	51	59	Right-handed alpha
Helix 107	AL8	7	64	70	Right-handed alpha
Helix 108	AL9	7	72	83	Right-handed alpha
Helix 109	AM1	7	97	108	Right-handed alpha
Helix 110	AM2	7	223	227	Right-handed 310
Helix 111	AM3	7	320	328	Right-handed alpha
Helix 112	AM4	7	333	338	Right-handed alpha
Helix 113	AM5	7	347	360	Right-handed alpha
Helix 114	AM6	7	365	369	Right-handed 310
Helix 115	AM7	7	386	398	Right-handed alpha
Helix 116	AM8	7	410	415	Right-handed alpha
Helix 117	AM9	7	432	437	Right-handed alpha
Helix 118	AN1	7	453	460	Right-handed alpha
Helix 119	AN2	7	508	514	Right-handed alpha
Helix 120	AN3	7	528	538	Right-handed alpha
Helix 121	AN4	7	538	543	Right-handed alpha
Helix 122	AN5	7	555	567	Right-handed alpha
Helix 123	AN6	7	574	592	Right-handed alpha
Helix 124	AN7	7	604	619	Right-handed alpha
Helix 125	AN8	7	628	641	Right-handed alpha
Helix 126	AN9	A	26	41	Right-handed alpha
Helix 127	AO1	A	54	65	Right-handed alpha
Helix 128	AO2	A	82	87	Right-handed alpha
Helix 129	AO3	A	183	201	Right-handed alpha
Helix 130	AO4	A	215	224	Right-handed alpha
Helix 131	AO5	A	229	244	Right-handed alpha
Helix 132	AO6	A	253	266	Right-handed alpha
Helix 133	AO7	A	307	312	Right-handed alpha
Helix 134	AO8	A	317	332	Right-handed alpha
Helix 135	AO9	A	336	340	Right-handed 310
Helix 136	AP1	A	346	358	Right-handed alpha
Helix 137	AP2	A	389	394	Right-handed alpha
Helix 138	AP3	A	395	397	Right-handed 310
Helix 139	AP4	A	404	414	Right-handed alpha
Helix 140	AP5	A	422	448	Right-handed alpha
Helix 141	AP6	A	473	490	Right-handed alpha
Helix 142	AP7	A	535	542	Right-handed alpha
Helix 143	AP8	A	563	570	Right-handed alpha
Helix 144	AP9	H	11	16	Right-handed alpha
Helix 145	AQ1	H	17	20	Right-handed 310
Helix 146	AQ2	H	34	40	Right-handed alpha
Helix 147	AQ3	H	41	43	Right-handed 310
Helix 148	AQ4	H	44	49	Right-handed alpha
Helix 149	AQ5	H	60	62	Right-handed 310
Helix 150	AQ6	H	63	98	Right-handed alpha
Helix 151	AQ7	H	114	133	Right-handed alpha
Helix 152	AQ8	L	6	11	Right-handed alpha
Helix 153	AQ9	L	48	54	Right-handed alpha
Helix 154	AR1	L	69	80	Right-handed alpha
Helix 155	AR2	L	91	101	Right-handed alpha
Helix 156	AR3	L	102	106	Right-handed 310
Helix 157	AR4	L	111	131	Right-handed alpha
Helix 158	AR5	L	152	156	Right-handed 310
Helix 159	AR6	L	159	169	Right-handed alpha
Helix 160	AR7	M	57	62	Right-handed 310
Helix 161	AR8	M	78	88	Right-handed alpha
Helix 162	AR9	M	104	109	Right-handed alpha
Helix 163	AS1	M	110	112	Right-handed 310
Helix 164	AS2	M	116	132	Right-handed alpha
Helix 165	AS3	M	152	171	Right-handed alpha
Helix 166	AS4	N	34	51	Right-handed alpha
Helix 167	AS5	N	61	80	Right-handed alpha
Helix 168	AS6	N	85	115	Right-handed alpha
Helix 169	AS7	N	118	126	Right-handed alpha
Helix 170	AS8	N	134	153	Right-handed alpha
Helix 171	AS9	N	219	223	Right-handed 310

There are 35 sheets in PDB entry 6RAW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	215	217	first strand
Strand 2	2	268	270	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	296	297	first strand
Strand 2	2	355	364	anti-parallel
Strand 3	2	304	307	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	296	297	first strand
Strand 2	2	355	364	anti-parallel
Strand 3	2	378	384	anti-parallel
Strand 4	2	423	425	parallel
Strand 5	2	402	403	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	568	571	first strand
Strand 2	2	610	613	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	593	595	first strand
Strand 2	2	604	606	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	134	136	first strand
Strand 2	3	192	199	anti-parallel
Strand 3	3	121	129	anti-parallel
Strand 4	3	231	239	anti-parallel
Strand 5	3	256	258	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	216	218	first strand
Strand 2	3	192	199	anti-parallel
Strand 3	3	121	129	anti-parallel
Strand 4	3	231	239	anti-parallel
Strand 5	3	262	264	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	362	363	first strand
Strand 2	3	402	403	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	285	286	first strand
Strand 2	4	392	403	anti-parallel
Strand 3	4	423	425	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	285	286	first strand
Strand 2	4	392	403	anti-parallel
Strand 3	4	411	419	anti-parallel
Strand 4	7	199	200	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	304	306	first strand
Strand 2	4	317	319	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	355	357	first strand
Strand 2	4	373	375	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	510	511	first strand
Strand 2	4	650	651	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	532	534	first strand
Strand 2	4	572	574	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	548	552	first strand
Strand 2	4	557	562	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	599	601	first strand
Strand 2	4	606	608	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	66	67	first strand
Strand 2	5	122	123	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	146	149	first strand
Strand 2	5	257	260	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	223	225	first strand
Strand 2	5	239	241	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	262	264	first strand
Strand 2	5	290	292	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	377	378	first strand
Strand 2	5	516	517	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	398	401	first strand
Strand 2	5	438	441	parallel
Strand 3	5	482	483	parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	135	136	first strand
Strand 2	6	198	202	anti-parallel
Strand 3	6	218	222	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	47	48	first strand
Strand 2	7	135	136	parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	162	164	first strand
Strand 2	7	272	278	anti-parallel
Strand 3	7	297	303	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	166	168	first strand
Strand 2	7	236	238	anti-parallel
Strand 3	7	252	254	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	174	176	first strand
Strand 2	7	230	232	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	179	180	first strand
Strand 2	7	193	194	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	376	377	first strand
Strand 2	7	483	485	parallel
Strand 3	7	441	444	parallel
Strand 4	7	401	404	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	417	418	first strand
Strand 2	7	429	430	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	18	20	first strand
Strand 2	A	71	73	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	284	289	first strand
Strand 2	A	370	375	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	504	505	first strand
Strand 2	A	515	516	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	14	17	first strand
Strand 2	L	42	45	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	183	184	first strand
Strand 2	N	226	227	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6RAW

Analysis of interatomic Contacts of Structural Units in PDB entry:
6RAW