Analysis of interatomic Contacts of Structural Units in PDB entry:
6RAY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6RAY entry

There are 12 chains in PDB entry 6RAY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
3	GLU 4	PHE 648
4	THR 157	THR 776
7	ARG 3	GLN 646
6	VAL 13	GLN 653
5	ASN 19	MET 652
A	LEU 6	VAL 572
H	MET 7	ILE 201
L	MET 1	SER 185
M	PRO 8	THR 174
N	GLY 21	ILE 228
2	LEU 174	TYR 798
X	A 26	T 38

There are180 helices in PDB entry 6RAY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	3	7	18	Right-handed alpha
Helix 2	AA2	3	22	28	Right-handed alpha
Helix 3	AA3	3	47	55	Right-handed alpha
Helix 4	AA4	3	55	65	Right-handed alpha
Helix 5	AA5	3	69	85	Right-handed alpha
Helix 6	AA6	3	86	90	Right-handed 310
Helix 7	AA7	3	201	205	Right-handed 310
Helix 8	AA8	3	274	284	Right-handed alpha
Helix 9	AA9	3	287	289	Right-handed 310
Helix 10	AB1	3	290	296	Right-handed alpha
Helix 11	AB2	3	309	317	Right-handed alpha
Helix 12	AB3	3	350	355	Right-handed alpha
Helix 13	AB4	3	410	423	Right-handed alpha
Helix 14	AB5	3	486	503	Right-handed alpha
Helix 15	AB6	3	558	563	Right-handed alpha
Helix 16	AB7	3	564	566	Right-handed 310
Helix 17	AB8	3	568	572	Right-handed 310
Helix 18	AB9	3	579	595	Right-handed alpha
Helix 19	AC1	3	600	604	Right-handed 310
Helix 20	AC2	3	609	624	Right-handed alpha
Helix 21	AC3	3	632	639	Right-handed alpha
Helix 22	AC4	3	640	647	Right-handed alpha
Helix 23	AC5	4	160	174	Right-handed alpha
Helix 24	AC6	4	177	182	Right-handed alpha
Helix 25	AC7	4	194	205	Right-handed alpha
Helix 26	AC8	4	215	220	Right-handed 310
Helix 27	AC9	4	223	232	Right-handed alpha
Helix 28	AD1	4	236	252	Right-handed alpha
Helix 29	AD2	4	447	455	Right-handed alpha
Helix 30	AD3	4	456	458	Right-handed 310
Helix 31	AD4	4	459	469	Right-handed alpha
Helix 32	AD5	4	475	477	Right-handed 310
Helix 33	AD6	4	478	487	Right-handed alpha
Helix 34	AD7	4	517	529	Right-handed alpha
Helix 35	AD8	4	577	581	Right-handed 310
Helix 36	AD9	4	631	636	Right-handed alpha
Helix 37	AE1	4	657	670	Right-handed alpha
Helix 38	AE2	4	670	675	Right-handed alpha
Helix 39	AE3	4	689	696	Right-handed alpha
Helix 40	AE4	4	709	721	Right-handed alpha
Helix 41	AE5	4	722	724	Right-handed 310
Helix 42	AE6	4	734	749	Right-handed alpha
Helix 43	AE7	4	757	768	Right-handed alpha
Helix 44	AE8	7	7	19	Right-handed alpha
Helix 45	AE9	7	31	41	Right-handed alpha
Helix 46	AF1	7	51	59	Right-handed alpha
Helix 47	AF2	7	71	83	Right-handed alpha
Helix 48	AF3	7	99	107	Right-handed alpha
Helix 49	AF4	7	223	227	Right-handed 310
Helix 50	AF5	7	260	262	Right-handed 310
Helix 51	AF6	7	323	330	Right-handed alpha
Helix 52	AF7	7	334	340	Right-handed alpha
Helix 53	AF8	7	347	360	Right-handed alpha
Helix 54	AF9	7	365	369	Right-handed 310
Helix 55	AG1	7	386	398	Right-handed alpha
Helix 56	AG2	7	432	437	Right-handed alpha
Helix 57	AG3	7	446	450	Right-handed 310
Helix 58	AG4	7	454	463	Right-handed alpha
Helix 59	AG5	7	508	514	Right-handed alpha
Helix 60	AG6	7	528	543	Right-handed alpha
Helix 61	AG7	7	555	565	Right-handed alpha
Helix 62	AG8	7	575	592	Right-handed alpha
Helix 63	AG9	7	602	617	Right-handed alpha
Helix 64	AH1	7	626	641	Right-handed alpha
Helix 65	AH2	6	15	30	Right-handed alpha
Helix 66	AH3	6	43	47	Right-handed alpha
Helix 67	AH4	6	60	65	Right-handed alpha
Helix 68	AH5	6	69	74	Right-handed alpha
Helix 69	AH6	6	76	94	Right-handed alpha
Helix 70	AH7	6	121	125	Right-handed 310
Helix 71	AH8	6	223	227	Right-handed 310
Helix 72	AH9	6	325	330	Right-handed alpha
Helix 73	AI1	6	331	333	Right-handed 310
Helix 74	AI2	6	336	345	Right-handed alpha
Helix 75	AI3	6	355	360	Right-handed alpha
Helix 76	AI4	6	361	364	Right-handed 310
Helix 77	AI5	6	397	405	Right-handed alpha
Helix 78	AI6	6	460	469	Right-handed alpha
Helix 79	AI7	6	507	513	Right-handed alpha
Helix 80	AI8	6	517	522	Right-handed alpha
Helix 81	AI9	6	533	545	Right-handed alpha
Helix 82	AJ1	6	560	571	Right-handed alpha
Helix 83	AJ2	6	580	585	Right-handed alpha
Helix 84	AJ3	6	585	598	Right-handed alpha
Helix 85	AJ4	6	610	627	Right-handed alpha
Helix 86	AJ5	6	634	645	Right-handed alpha
Helix 87	AJ6	6	646	652	Right-handed 310
Helix 88	AJ7	5	27	32	Right-handed alpha
Helix 89	AJ8	5	32	41	Right-handed alpha
Helix 90	AJ9	5	52	58	Right-handed alpha
Helix 91	AK1	5	71	76	Right-handed alpha
Helix 92	AK2	5	79	84	Right-handed alpha
Helix 93	AK3	5	86	106	Right-handed alpha
Helix 94	AK4	5	136	140	Right-handed 310
Helix 95	AK5	5	211	214	Right-handed 310
Helix 96	AK6	5	313	324	Right-handed alpha
Helix 97	AK7	5	330	335	Right-handed 310
Helix 98	AK8	5	343	351	Right-handed alpha
Helix 99	AK9	5	383	390	Right-handed alpha
Helix 100	AL1	5	452	460	Right-handed alpha
Helix 101	AL2	5	489	495	Right-handed alpha
Helix 102	AL3	5	505	509	Right-handed 310
Helix 103	AL4	5	522	532	Right-handed alpha
Helix 104	AL5	5	533	538	Right-handed alpha
Helix 105	AL6	5	554	566	Right-handed alpha
Helix 106	AL7	5	608	613	Right-handed alpha
Helix 107	AL8	5	616	626	Right-handed alpha
Helix 108	AL9	5	637	648	Right-handed alpha
Helix 109	AM1	A	10	14	Right-handed 310
Helix 110	AM2	A	27	43	Right-handed alpha
Helix 111	AM3	A	54	63	Right-handed alpha
Helix 112	AM4	A	128	134	Right-handed alpha
Helix 113	AM5	A	183	198	Right-handed alpha
Helix 114	AM6	A	215	224	Right-handed alpha
Helix 115	AM7	A	229	244	Right-handed alpha
Helix 116	AM8	A	256	266	Right-handed alpha
Helix 117	AM9	A	298	306	Right-handed alpha
Helix 118	AN1	A	306	314	Right-handed alpha
Helix 119	AN2	A	318	332	Right-handed alpha
Helix 120	AN3	A	336	340	Right-handed 310
Helix 121	AN4	A	341	345	Right-handed 310
Helix 122	AN5	A	346	358	Right-handed alpha
Helix 123	AN6	A	389	394	Right-handed alpha
Helix 124	AN7	A	404	415	Right-handed alpha
Helix 125	AN8	A	422	439	Right-handed alpha
Helix 126	AN9	A	440	442	Right-handed 310
Helix 127	AO1	A	443	448	Right-handed alpha
Helix 128	AO2	A	474	484	Right-handed alpha
Helix 129	AO3	A	529	534	Right-handed 310
Helix 130	AO4	A	535	542	Right-handed alpha
Helix 131	AO5	A	563	570	Right-handed alpha
Helix 132	AO6	H	10	18	Right-handed 310
Helix 133	AO7	H	34	40	Right-handed alpha
Helix 134	AO8	H	44	49	Right-handed alpha
Helix 135	AO9	H	60	62	Right-handed 310
Helix 136	AP1	H	63	99	Right-handed alpha
Helix 137	AP2	H	115	126	Right-handed alpha
Helix 138	AP3	H	126	133	Right-handed alpha
Helix 139	AP4	L	4	10	Right-handed alpha
Helix 140	AP5	L	49	54	Right-handed alpha
Helix 141	AP6	L	73	78	Right-handed alpha
Helix 142	AP7	L	79	81	Right-handed 310
Helix 143	AP8	L	94	103	Right-handed alpha
Helix 144	AP9	L	104	106	Right-handed 310
Helix 145	AQ1	L	111	133	Right-handed alpha
Helix 146	AQ2	L	152	156	Right-handed 310
Helix 147	AQ3	L	160	169	Right-handed alpha
Helix 148	AQ4	M	57	60	Right-handed 310
Helix 149	AQ5	M	78	86	Right-handed alpha
Helix 150	AQ6	M	107	112	Right-handed alpha
Helix 151	AQ7	M	117	126	Right-handed alpha
Helix 152	AQ8	M	127	131	Right-handed 310
Helix 153	AQ9	M	152	172	Right-handed alpha
Helix 154	AR1	N	36	41	Right-handed alpha
Helix 155	AR2	N	43	51	Right-handed alpha
Helix 156	AR3	N	61	79	Right-handed alpha
Helix 157	AR4	N	85	97	Right-handed alpha
Helix 158	AR5	N	97	115	Right-handed alpha
Helix 159	AR6	N	118	124	Right-handed alpha
Helix 160	AR7	N	134	135	Right-handed 310
Helix 161	AR8	N	137	137	Right-handed 310
Helix 162	AR9	N	138	151	Right-handed alpha
Helix 163	AS1	N	152	155	Right-handed 310
Helix 164	AS2	N	218	223	Right-handed alpha
Helix 165	AS3	2	176	186	Right-handed alpha
Helix 166	AS4	2	198	211	Right-handed alpha
Helix 167	AS5	2	219	226	Right-handed alpha
Helix 168	AS6	2	236	256	Right-handed alpha
Helix 169	AS7	2	457	465	Right-handed alpha
Helix 170	AS8	2	473	484	Right-handed alpha
Helix 171	AS9	2	519	525	Right-handed alpha
Helix 172	AT1	2	578	592	Right-handed alpha
Helix 173	AT2	2	635	640	Right-handed alpha
Helix 174	AT3	2	653	668	Right-handed alpha
Helix 175	AT4	2	697	708	Right-handed alpha
Helix 176	AT5	2	717	730	Right-handed alpha
Helix 177	AT6	2	741	757	Right-handed alpha
Helix 178	AT7	2	764	779	Right-handed alpha
Helix 179	AT8	2	780	783	Right-handed 310
Helix 180	AT9	2	788	795	Right-handed alpha

There are 31 sheets in PDB entry 6RAY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	107	108	first strand
Strand 2	3	122	129	parallel
Strand 3	3	190	199	anti-parallel
Strand 4	3	213	218	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	135	138	first strand
Strand 2	3	190	199	anti-parallel
Strand 3	3	122	129	anti-parallel
Strand 4	3	231	239	anti-parallel
Strand 5	3	256	261	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	140	143	first strand
Strand 2	3	152	155	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	372	376	first strand
Strand 2	4	354	358	anti-parallel
Strand 3	4	285	292	anti-parallel
Strand 4	4	390	403	anti-parallel
Strand 5	4	411	419	anti-parallel
Strand 6	7	199	200	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	304	306	first strand
Strand 2	4	317	319	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	176	179	first strand
Strand 2	7	228	230	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	232	235	first strand
Strand 2	7	255	258	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	272	273	first strand
Strand 2	7	303	304	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	401	403	first strand
Strand 2	7	441	443	parallel
Strand 3	7	483	488	parallel
Strand 4	7	377	380	parallel
Strand 5	7	517	518	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	56	58	first strand
Strand 2	6	107	109	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	136	139	first strand
Strand 2	6	198	203	anti-parallel
Strand 3	6	217	222	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	408	412	first strand
Strand 2	6	448	452	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	66	67	first strand
Strand 2	5	122	123	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	146	147	first strand
Strand 2	5	258	261	anti-parallel
Strand 3	5	293	297	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	149	150	first strand
Strand 2	5	223	225	anti-parallel
Strand 3	5	239	241	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	164	165	first strand
Strand 2	5	209	210	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	374	377	first strand
Strand 2	5	513	516	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	439	442	first strand
Strand 2	5	481	484	parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	18	19	first strand
Strand 2	A	71	74	parallel
Strand 3	A	94	97	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	284	289	first strand
Strand 2	A	370	375	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	501	505	first strand
Strand 2	A	515	519	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	14	17	first strand
Strand 2	L	42	45	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	22	23	first strand
Strand 2	M	54	55	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	183	184	first strand
Strand 2	N	226	227	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	215	218	first strand
Strand 2	2	268	271	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	296	297	first strand
Strand 2	2	363	364	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	303	305	first strand
Strand 2	2	357	359	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	380	382	first strand
Strand 2	2	423	425	parallel
Strand 3	2	402	403	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	397	399	first strand
Strand 2	2	429	431	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	506	507	first strand
Strand 2	2	646	647	parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	529	530	first strand
Strand 2	2	568	570	parallel
Strand 3	2	610	611	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6RAY

Analysis of interatomic Contacts of Structural Units in PDB entry:
6RAY