Analysis of interatomic Contacts of Structural Units in PDB entry:
6RAZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6RAZ entry

There are 13 chains in PDB entry 6RAZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
X	C 15	A 35
Y	G 8	C 9
A	LEU 6	VAL 572
H	MET 7	ILE 201
L	MET 1	SER 185
M	PRO 8	THR 174
N	GLY 21	ILE 228
2	LEU 174	TYR 798
5	ASN 19	MET 652
6	VAL 13	ARG 650
3	GLU 4	VAL 643
4	GLN 151	THR 776
7	ARG 3	GLN 646

There are180 helices in PDB entry 6RAZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	14	Right-handed 310
Helix 2	AA2	A	26	43	Right-handed alpha
Helix 3	AA3	A	55	63	Right-handed alpha
Helix 4	AA4	A	64	66	Right-handed 310
Helix 5	AA5	A	82	87	Right-handed alpha
Helix 6	AA6	A	126	130	Right-handed 310
Helix 7	AA7	A	186	198	Right-handed alpha
Helix 8	AA8	A	215	223	Right-handed alpha
Helix 9	AA9	A	224	226	Right-handed 310
Helix 10	AB1	A	229	244	Right-handed alpha
Helix 11	AB2	A	253	266	Right-handed alpha
Helix 12	AB3	A	298	306	Right-handed alpha
Helix 13	AB4	A	306	314	Right-handed alpha
Helix 14	AB5	A	318	332	Right-handed alpha
Helix 15	AB6	A	346	358	Right-handed alpha
Helix 16	AB7	A	386	394	Right-handed alpha
Helix 17	AB8	A	404	415	Right-handed alpha
Helix 18	AB9	A	422	448	Right-handed alpha
Helix 19	AC1	A	474	484	Right-handed alpha
Helix 20	AC2	A	493	497	Right-handed 310
Helix 21	AC3	A	530	535	Right-handed alpha
Helix 22	AC4	A	535	542	Right-handed alpha
Helix 23	AC5	A	563	571	Right-handed alpha
Helix 24	AC6	H	11	16	Right-handed alpha
Helix 25	AC7	H	17	20	Right-handed 310
Helix 26	AC8	H	34	40	Right-handed alpha
Helix 27	AC9	H	44	50	Right-handed alpha
Helix 28	AD1	H	60	62	Right-handed 310
Helix 29	AD2	H	63	99	Right-handed alpha
Helix 30	AD3	H	114	133	Right-handed alpha
Helix 31	AD4	L	9	12	Right-handed 310
Helix 32	AD5	L	49	54	Right-handed alpha
Helix 33	AD6	L	70	78	Right-handed alpha
Helix 34	AD7	L	79	81	Right-handed 310
Helix 35	AD8	L	94	103	Right-handed alpha
Helix 36	AD9	L	104	106	Right-handed 310
Helix 37	AE1	L	111	131	Right-handed alpha
Helix 38	AE2	L	152	156	Right-handed 310
Helix 39	AE3	L	160	169	Right-handed alpha
Helix 40	AE4	M	57	61	Right-handed 310
Helix 41	AE5	M	78	86	Right-handed alpha
Helix 42	AE6	M	103	109	Right-handed alpha
Helix 43	AE7	M	117	126	Right-handed alpha
Helix 44	AE8	M	127	131	Right-handed 310
Helix 45	AE9	M	152	172	Right-handed alpha
Helix 46	AF1	N	34	51	Right-handed alpha
Helix 47	AF2	N	61	80	Right-handed alpha
Helix 48	AF3	N	84	115	Right-handed alpha
Helix 49	AF4	N	118	127	Right-handed alpha
Helix 50	AF5	N	134	153	Right-handed alpha
Helix 51	AF6	N	218	223	Right-handed alpha
Helix 52	AF7	2	175	189	Right-handed alpha
Helix 53	AF8	2	198	211	Right-handed alpha
Helix 54	AF9	2	219	227	Right-handed alpha
Helix 55	AG1	2	236	256	Right-handed alpha
Helix 56	AG2	2	257	260	Right-handed 310
Helix 57	AG3	2	448	453	Right-handed alpha
Helix 58	AG4	2	457	465	Right-handed alpha
Helix 59	AG5	2	473	484	Right-handed alpha
Helix 60	AG6	2	520	525	Right-handed alpha
Helix 61	AG7	2	573	577	Right-handed 310
Helix 62	AG8	2	578	588	Right-handed alpha
Helix 63	AG9	2	635	640	Right-handed alpha
Helix 64	AH1	2	660	668	Right-handed alpha
Helix 65	AH2	2	697	707	Right-handed alpha
Helix 66	AH3	2	716	718	Right-handed 310
Helix 67	AH4	2	719	730	Right-handed alpha
Helix 68	AH5	2	741	752	Right-handed alpha
Helix 69	AH6	2	752	759	Right-handed alpha
Helix 70	AH7	2	764	780	Right-handed alpha
Helix 71	AH8	2	781	783	Right-handed 310
Helix 72	AH9	2	787	795	Right-handed alpha
Helix 73	AI1	2	796	798	Right-handed 310
Helix 74	AI2	5	27	32	Right-handed alpha
Helix 75	AI3	5	32	39	Right-handed alpha
Helix 76	AI4	5	52	58	Right-handed alpha
Helix 77	AI5	5	78	86	Right-handed alpha
Helix 78	AI6	5	86	103	Right-handed alpha
Helix 79	AI7	5	104	107	Right-handed 310
Helix 80	AI8	5	211	214	Right-handed 310
Helix 81	AI9	5	313	324	Right-handed alpha
Helix 82	AJ1	5	331	335	Right-handed 310
Helix 83	AJ2	5	343	351	Right-handed 310
Helix 84	AJ3	5	383	394	Right-handed alpha
Helix 85	AJ4	5	449	452	Right-handed 310
Helix 86	AJ5	5	453	459	Right-handed alpha
Helix 87	AJ6	5	489	495	Right-handed alpha
Helix 88	AJ7	5	522	532	Right-handed alpha
Helix 89	AJ8	5	533	538	Right-handed alpha
Helix 90	AJ9	5	554	566	Right-handed alpha
Helix 91	AK1	5	608	613	Right-handed alpha
Helix 92	AK2	5	616	620	Right-handed alpha
Helix 93	AK3	5	621	626	Right-handed alpha
Helix 94	AK4	5	637	648	Right-handed alpha
Helix 95	AK5	6	15	30	Right-handed alpha
Helix 96	AK6	6	41	47	Right-handed alpha
Helix 97	AK7	6	60	65	Right-handed alpha
Helix 98	AK8	6	69	73	Right-handed 310
Helix 99	AK9	6	76	94	Right-handed alpha
Helix 100	AL1	6	121	125	Right-handed 310
Helix 101	AL2	6	325	330	Right-handed alpha
Helix 102	AL3	6	330	335	Right-handed alpha
Helix 103	AL4	6	337	345	Right-handed alpha
Helix 104	AL5	6	355	360	Right-handed alpha
Helix 105	AL6	6	360	365	Right-handed alpha
Helix 106	AL7	6	395	405	Right-handed alpha
Helix 107	AL8	6	417	421	Right-handed 310
Helix 108	AL9	6	461	466	Right-handed alpha
Helix 109	AM1	6	507	513	Right-handed alpha
Helix 110	AM2	6	517	522	Right-handed alpha
Helix 111	AM3	6	536	545	Right-handed alpha
Helix 112	AM4	6	560	571	Right-handed alpha
Helix 113	AM5	6	572	574	Right-handed 310
Helix 114	AM6	6	580	585	Right-handed alpha
Helix 115	AM7	6	585	599	Right-handed alpha
Helix 116	AM8	6	609	627	Right-handed alpha
Helix 117	AM9	6	634	650	Right-handed alpha
Helix 118	AN1	3	7	18	Right-handed alpha
Helix 119	AN2	3	22	29	Right-handed alpha
Helix 120	AN3	3	47	55	Right-handed alpha
Helix 121	AN4	3	55	64	Right-handed alpha
Helix 122	AN5	3	68	83	Right-handed alpha
Helix 123	AN6	3	201	205	Right-handed 310
Helix 124	AN7	3	274	284	Right-handed alpha
Helix 125	AN8	3	285	287	Right-handed 310
Helix 126	AN9	3	289	296	Right-handed alpha
Helix 127	AO1	3	309	318	Right-handed alpha
Helix 128	AO2	3	393	397	Right-handed 310
Helix 129	AO3	3	414	423	Right-handed alpha
Helix 130	AO4	3	488	503	Right-handed alpha
Helix 131	AO5	3	558	563	Right-handed alpha
Helix 132	AO6	3	564	566	Right-handed 310
Helix 133	AO7	3	568	572	Right-handed 310
Helix 134	AO8	3	579	595	Right-handed alpha
Helix 135	AO9	3	609	612	Right-handed 310
Helix 136	AP1	3	613	624	Right-handed alpha
Helix 137	AP2	3	632	638	Right-handed alpha
Helix 138	AP3	4	160	174	Right-handed alpha
Helix 139	AP4	4	177	182	Right-handed alpha
Helix 140	AP5	4	194	203	Right-handed alpha
Helix 141	AP6	4	215	220	Right-handed 310
Helix 142	AP7	4	222	232	Right-handed alpha
Helix 143	AP8	4	236	252	Right-handed alpha
Helix 144	AP9	4	278	282	Right-handed 310
Helix 145	AQ1	4	447	456	Right-handed alpha
Helix 146	AQ2	4	457	462	Right-handed 310
Helix 147	AQ3	4	464	469	Right-handed alpha
Helix 148	AQ4	4	481	485	Right-handed 310
Helix 149	AQ5	4	519	529	Right-handed alpha
Helix 150	AQ6	4	591	595	Right-handed 310
Helix 151	AQ7	4	631	635	Right-handed 310
Helix 152	AQ8	4	661	669	Right-handed alpha
Helix 153	AQ9	4	670	675	Right-handed alpha
Helix 154	AR1	4	687	696	Right-handed alpha
Helix 155	AR2	4	709	721	Right-handed alpha
Helix 156	AR3	4	722	724	Right-handed 310
Helix 157	AR4	4	734	743	Right-handed alpha
Helix 158	AR5	4	758	768	Right-handed alpha
Helix 159	AR6	7	7	19	Right-handed alpha
Helix 160	AR7	7	31	42	Right-handed alpha
Helix 161	AR8	7	51	57	Right-handed alpha
Helix 162	AR9	7	71	83	Right-handed alpha
Helix 163	AS1	7	97	108	Right-handed alpha
Helix 164	AS2	7	223	227	Right-handed 310
Helix 165	AS3	7	260	262	Right-handed 310
Helix 166	AS4	7	323	330	Right-handed alpha
Helix 167	AS5	7	334	340	Right-handed alpha
Helix 168	AS6	7	347	360	Right-handed alpha
Helix 169	AS7	7	365	369	Right-handed 310
Helix 170	AS8	7	386	398	Right-handed alpha
Helix 171	AS9	7	410	415	Right-handed alpha
Helix 172	AT1	7	432	437	Right-handed alpha
Helix 173	AT2	7	446	451	Right-handed alpha
Helix 174	AT3	7	454	461	Right-handed alpha
Helix 175	AT4	7	508	515	Right-handed alpha
Helix 176	AT5	7	528	543	Right-handed alpha
Helix 177	AT6	7	555	565	Right-handed alpha
Helix 178	AT7	7	575	594	Right-handed alpha
Helix 179	AT8	7	602	621	Right-handed alpha
Helix 180	AT9	7	626	641	Right-handed alpha

There are 32 sheets in PDB entry 6RAZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	73	74	first strand
Strand 2	A	96	97	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	284	288	first strand
Strand 2	A	371	376	anti-parallel
Strand 3	A	384	385	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	459	460	first strand
Strand 2	A	501	502	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	14	17	first strand
Strand 2	L	42	45	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	22	23	first strand
Strand 2	M	54	55	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	180	181	first strand
Strand 2	N	211	212	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	215	218	first strand
Strand 2	2	268	271	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	296	297	first strand
Strand 2	2	363	364	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	303	305	first strand
Strand 2	2	357	360	anti-parallel
Strand 3	2	382	384	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	397	399	first strand
Strand 2	2	429	431	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	403	404	first strand
Strand 2	2	423	424	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	529	530	first strand
Strand 2	2	568	570	parallel
Strand 3	2	610	611	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	224	225	first strand
Strand 2	5	146	150	anti-parallel
Strand 3	5	257	260	anti-parallel
Strand 4	5	296	297	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	164	165	first strand
Strand 2	5	209	210	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	439	441	first strand
Strand 2	5	481	483	parallel
Strand 3	5	374	378	parallel
Strand 4	5	514	517	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	136	139	first strand
Strand 2	6	199	203	anti-parallel
Strand 3	6	217	220	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	411	412	first strand
Strand 2	6	451	452	parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	134	138	first strand
Strand 2	3	190	199	anti-parallel
Strand 3	3	214	217	anti-parallel
Strand 4	3	256	258	parallel
Strand 5	3	230	239	anti-parallel
Strand 6	3	122	129	anti-parallel
Strand 7	3	190	199	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	152	155	first strand
Strand 2	3	140	144	anti-parallel
Strand 3	3	182	184	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	372	373	first strand
Strand 2	3	390	391	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	372	375	first strand
Strand 2	4	355	358	anti-parallel
Strand 3	4	285	292	anti-parallel
Strand 4	4	390	400	anti-parallel
Strand 5	4	416	419	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	372	375	first strand
Strand 2	4	355	358	anti-parallel
Strand 3	4	285	292	anti-parallel
Strand 4	4	390	400	anti-parallel
Strand 5	4	423	425	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	301	302	first strand
Strand 2	4	349	350	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	304	306	first strand
Strand 2	4	317	319	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	411	412	first strand
Strand 2	7	199	200	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	532	536	first strand
Strand 2	4	572	576	parallel
Strand 3	4	614	616	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	47	49	first strand
Strand 2	7	135	137	parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	160	168	first strand
Strand 2	7	232	238	anti-parallel
Strand 3	7	253	258	anti-parallel
Strand 4	7	297	299	parallel
Strand 5	7	270	278	anti-parallel
Strand 6	7	160	168	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	176	179	first strand
Strand 2	7	228	230	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	181	182	first strand
Strand 2	7	191	192	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	440	445	first strand
Strand 2	7	482	487	parallel
Strand 3	7	376	381	parallel
Strand 4	7	517	521	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	466	469	first strand
Strand 2	7	476	478	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6RAZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6RAZ