Analysis of interatomic Contacts of Structural Units in PDB entry:
6RB2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6RB2 entry

There is 1 chain in PDB entry 6RB2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 994
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 6RB2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 17Right-handed alpha
Helix 2
AA2
A
25 37Right-handed alpha
Helix 3
AA3
A
59 78Right-handed alpha
Helix 4
AA4
A
85 121Right-handed alpha
Helix 5
AA5
A
143 145Right-handed 310
Helix 6
AA6
A
177 182Right-handed alpha
Helix 7
AA7
A
226 229Right-handed 310
Helix 8
AA8
A
230 235Right-handed alpha
Helix 9
AA9
A
247 275Right-handed alpha
Helix 10
AB1
A
288 307Right-handed alpha
Helix 11
AB2
A
310 328Right-handed alpha
Helix 12
AB3
A
337 342Right-handed alpha
Helix 13
AB4
A
407 420Right-handed alpha
Helix 14
AB5
A
439 453Right-handed alpha
Helix 15
AB6
A
465 469Right-handed 310
Helix 16
AB7
A
470 478Right-handed alpha
Helix 17
AB8
A
517 524Right-handed alpha
Helix 18
AB9
A
538 555Right-handed alpha
Helix 19
AC1
A
572 576Right-handed 310
Helix 20
AC2
A
583 588Right-handed alpha
Helix 21
AC3
A
606 616Right-handed alpha
Helix 22
AC4
A
628 639Right-handed alpha
Helix 23
AC5
A
655 661Right-handed alpha
Helix 24
AC6
A
662 670Right-handed alpha
Helix 25
AC7
A
680 693Right-handed alpha
Helix 26
AC8
A
704 706Right-handed 310
Helix 27
AC9
A
707 714Right-handed alpha
Helix 28
AD1
A
724 731Right-handed alpha
Helix 29
AD2
A
740 781Right-handed alpha
Helix 30
AD3
A
788 800Right-handed alpha
Helix 31
AD4
A
801 806Right-handed alpha
Helix 32
AD5
A
807 810Right-handed 310
Helix 33
AD6
A
832 856Right-handed alpha
Helix 34
AD7
A
893 915Right-handed alpha
Helix 35
AD8
A
926 929Right-handed 310
Helix 36
AD9
A
930 950Right-handed alpha
Helix 37
AE1
A
964 975Right-handed alpha
Helix 38
AE2
A
975 991Right-handed alpha
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There are 7 sheets in PDB entry 6RB2. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 141first strand
Strand 2
A
126 130anti-parallel
Strand 3
A
150 153anti-parallel
Strand 4
A
219 225anti-parallel
Strand 5
A
162 165anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
331 333first strand
Strand 2
A
733 735anti-parallel
Strand 3
A
716 720parallel
Strand 4
A
698 702parallel
Strand 5
A
347 351parallel
Strand 6
A
620 624parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
424 428first strand
Strand 2
A
433 437anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
376 383first strand
Strand 2
A
362 373anti-parallel
Strand 3
A
591 600anti-parallel
Strand 4
A
560 567anti-parallel
Strand 5
A
511 516anti-parallel
Strand 6
A
493 500anti-parallel
Strand 7
A
479 485anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
533 536first strand
Strand 2
A
525 530anti-parallel
Strand 3
A
591 593parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
652 654first strand
Strand 2
A
675 677parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 176first strand
Strand 2
A
213 216anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il