Analysis of interatomic Contacts of Structural Units in PDB entry:
6RB3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6RB3 entry

There are 3 chains in PDB entry 6RB3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 MET -1ALA 265
A
 MET -1ALA 265
B
 MET -1ALA 265
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6RB3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
E
32 37Right-handed 310
Helix 2
AA2
E
39 47Right-handed alpha
Helix 3
AA3
E
68 84Right-handed alpha
Helix 4
AA4
E
95 112Right-handed alpha
Helix 5
AA5
E
126 136Right-handed alpha
Helix 6
AA6
E
141 155Right-handed alpha
Helix 7
AA7
E
159 169Right-handed alpha
Helix 8
AA8
E
174 193Right-handed alpha
Helix 9
AA9
E
194 201Right-handed alpha
Helix 10
AB1
E
218 231Right-handed alpha
Helix 11
AB2
E
245 250Right-handed alpha
Helix 12
AB3
E
250 264Right-handed alpha
Helix 13
AB4
A
32 37Right-handed 310
Helix 14
AB5
A
39 47Right-handed alpha
Helix 15
AB6
A
68 83Right-handed alpha
Helix 16
AB7
A
95 108Right-handed alpha
Helix 17
AB8
A
126 136Right-handed alpha
Helix 18
AB9
A
141 155Right-handed alpha
Helix 19
AC1
A
159 169Right-handed alpha
Helix 20
AC2
A
174 193Right-handed alpha
Helix 21
AC3
A
194 201Right-handed alpha
Helix 22
AC4
A
218 231Right-handed alpha
Helix 23
AC5
A
245 250Right-handed alpha
Helix 24
AC6
A
250 265Right-handed alpha
Helix 25
AC7
B
32 37Right-handed 310
Helix 26
AC8
B
39 47Right-handed alpha
Helix 27
AC9
B
68 83Right-handed alpha
Helix 28
AD1
B
95 112Right-handed alpha
Helix 29
AD2
B
126 136Right-handed alpha
Helix 30
AD3
B
141 155Right-handed alpha
Helix 31
AD4
B
159 168Right-handed alpha
Helix 32
AD5
B
174 193Right-handed alpha
Helix 33
AD6
B
194 201Right-handed alpha
Helix 34
AD7
B
218 231Right-handed alpha
Helix 35
AD8
B
245 250Right-handed alpha
Helix 36
AD9
B
250 265Right-handed alpha
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There are 3 sheets in PDB entry 6RB3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1 5first strand
Strand 2
E
8 15anti-parallel
Strand 3
E
49 52anti-parallel
Strand 4
E
22 26parallel
Strand 5
E
88 93parallel
Strand 6
E
114 118parallel
Strand 7
E
207 212parallel
Strand 8
E
234 238parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1 5first strand
Strand 2
A
8 15anti-parallel
Strand 3
A
49 52anti-parallel
Strand 4
A
22 26parallel
Strand 5
A
88 93parallel
Strand 6
A
114 118parallel
Strand 7
A
207 212parallel
Strand 8
A
234 238parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1 5first strand
Strand 2
B
8 15anti-parallel
Strand 3
B
49 52anti-parallel
Strand 4
B
22 26parallel
Strand 5
B
88 93parallel
Strand 6
B
114 118parallel
Strand 7
B
207 212parallel
Strand 8
B
234 238parallel
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