Analysis of interatomic Contacts of Structural Units in PDB entry:
6RB7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6RB7 entry

There are 4 chains in PDB entry 6RB7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 305
B
 MET 1LEU 305
E
 MET 1LEU 305
F
 MET 1LEU 305
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 6RB7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 8Right-handed 310
Helix 2
AA2
A
25 40Right-handed alpha
Helix 3
AA3
A
48 56Right-handed 310
Helix 4
AA4
A
57 73Right-handed alpha
Helix 5
AA5
A
86 100Right-handed alpha
Helix 6
AA6
A
116 130Right-handed alpha
Helix 7
AA7
A
141 146Right-handed alpha
Helix 8
AA8
A
150 158Right-handed alpha
Helix 9
AA9
A
172 184Right-handed alpha
Helix 10
AB1
A
193 195Right-handed 310
Helix 11
AB2
A
196 204Right-handed alpha
Helix 12
AB3
A
212 215Right-handed 310
Helix 13
AB4
A
216 229Right-handed alpha
Helix 14
AB5
A
231 251Right-handed alpha
Helix 15
AB6
A
255 269Right-handed alpha
Helix 16
AB7
A
285 305Right-handed alpha
Helix 17
AB8
B
4 8Right-handed 310
Helix 18
AB9
B
25 40Right-handed alpha
Helix 19
AC1
B
48 56Right-handed 310
Helix 20
AC2
B
57 73Right-handed alpha
Helix 21
AC3
B
86 100Right-handed alpha
Helix 22
AC4
B
116 131Right-handed alpha
Helix 23
AC5
B
141 146Right-handed alpha
Helix 24
AC6
B
150 159Right-handed alpha
Helix 25
AC7
B
172 184Right-handed alpha
Helix 26
AC8
B
193 195Right-handed 310
Helix 27
AC9
B
196 203Right-handed alpha
Helix 28
AD1
B
212 215Right-handed 310
Helix 29
AD2
B
216 230Right-handed alpha
Helix 30
AD3
B
231 251Right-handed alpha
Helix 31
AD4
B
255 269Right-handed alpha
Helix 32
AD5
B
285 305Right-handed alpha
Helix 33
AD6
E
4 8Right-handed 310
Helix 34
AD7
E
25 40Right-handed alpha
Helix 35
AD8
E
48 56Right-handed 310
Helix 36
AD9
E
57 73Right-handed alpha
Helix 37
AE1
E
86 100Right-handed alpha
Helix 38
AE2
E
116 131Right-handed alpha
Helix 39
AE3
E
141 146Right-handed alpha
Helix 40
AE4
E
150 159Right-handed alpha
Helix 41
AE5
E
172 184Right-handed alpha
Helix 42
AE6
E
193 195Right-handed 310
Helix 43
AE7
E
196 203Right-handed alpha
Helix 44
AE8
E
212 215Right-handed 310
Helix 45
AE9
E
216 229Right-handed alpha
Helix 46
AF1
E
231 251Right-handed alpha
Helix 47
AF2
E
255 269Right-handed alpha
Helix 48
AF3
E
285 305Right-handed alpha
Helix 49
AF4
F
4 8Right-handed 310
Helix 50
AF5
F
25 40Right-handed alpha
Helix 51
AF6
F
48 56Right-handed 310
Helix 52
AF7
F
57 73Right-handed alpha
Helix 53
AF8
F
86 101Right-handed alpha
Helix 54
AF9
F
116 131Right-handed alpha
Helix 55
AG1
F
141 146Right-handed alpha
Helix 56
AG2
F
150 159Right-handed alpha
Helix 57
AG3
F
172 184Right-handed alpha
Helix 58
AG4
F
193 195Right-handed 310
Helix 59
AG5
F
196 203Right-handed alpha
Helix 60
AG6
F
212 215Right-handed 310
Helix 61
AG7
F
216 229Right-handed alpha
Helix 62
AG8
F
231 251Right-handed alpha
Helix 63
AG9
F
255 269Right-handed alpha
Helix 64
AH1
F
283 285Right-handed 310
Helix 65
AH2
F
286 305Right-handed alpha
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There are 4 sheets in PDB entry 6RB7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 12first strand
Strand 2
A
207 210parallel
Strand 3
A
188 191parallel
Strand 4
A
163 168parallel
Strand 5
A
135 140parallel
Strand 6
A
104 107parallel
Strand 7
A
77 81parallel
Strand 8
A
43 46parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 12first strand
Strand 2
B
207 210parallel
Strand 3
B
188 191parallel
Strand 4
B
163 168parallel
Strand 5
B
135 140parallel
Strand 6
B
104 107parallel
Strand 7
B
77 81parallel
Strand 8
B
43 46parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
10 12first strand
Strand 2
E
207 210parallel
Strand 3
E
188 191parallel
Strand 4
E
163 168parallel
Strand 5
E
135 140parallel
Strand 6
E
104 107parallel
Strand 7
E
77 81parallel
Strand 8
E
43 46parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
10 12first strand
Strand 2
F
207 210parallel
Strand 3
F
188 191parallel
Strand 4
F
163 168parallel
Strand 5
F
135 140parallel
Strand 6
F
104 107parallel
Strand 7
F
77 81parallel
Strand 8
F
43 46parallel
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