Analysis of interatomic Contacts of Structural Units in PDB entry:
6RCZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6RCZ entry

There are 2 chains in PDB entry 6RCZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 2ARG 266
E
 ALA 12GLY 265
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6RCZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 30Right-handed 310
Helix 2
AA2
A
48 52Right-handed 310
Helix 3
AA3
A
56 69Right-handed alpha
Helix 4
AA4
A
80 89Right-handed alpha
Helix 5
AA5
A
98 100Right-handed 310
Helix 6
AA6
A
117 134Right-handed alpha
Helix 7
AA7
A
153 155Right-handed 310
Helix 8
AA8
A
156 171Right-handed alpha
Helix 9
AA9
A
192 201Right-handed alpha
Helix 10
AB1
A
217 219Right-handed 310
Helix 11
AB2
A
220 230Right-handed alpha
Helix 12
AB3
A
250 266Right-handed alpha
Helix 13
AB4
E
28 30Right-handed 310
Helix 14
AB5
E
48 52Right-handed 310
Helix 15
AB6
E
56 69Right-handed alpha
Helix 16
AB7
E
80 89Right-handed alpha
Helix 17
AB8
E
98 100Right-handed 310
Helix 18
AB9
E
117 134Right-handed alpha
Helix 19
AC1
E
153 155Right-handed 310
Helix 20
AC2
E
156 171Right-handed alpha
Helix 21
AC3
E
192 201Right-handed alpha
Helix 22
AC4
E
217 219Right-handed 310
Helix 23
AC5
E
220 230Right-handed alpha
Helix 24
AC6
E
250 265Right-handed alpha
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There are 4 sheets in PDB entry 6RCZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 112first strand
Strand 2
A
102 104anti-parallel
Strand 3
A
95 97anti-parallel
Strand 4
A
73 76parallel
Strand 5
A
32 36parallel
Strand 6
A
210 215parallel
Strand 7
A
233 237parallel
Strand 8
A
246 248parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 142first strand
Strand 2
A
145 149anti-parallel
Strand 3
A
183 188anti-parallel
Strand 4
A
175 180anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
110 112first strand
Strand 2
E
102 104anti-parallel
Strand 3
E
95 97anti-parallel
Strand 4
E
73 76parallel
Strand 5
E
32 36parallel
Strand 6
E
210 215parallel
Strand 7
E
233 237parallel
Strand 8
E
246 248parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
138 142first strand
Strand 2
E
145 149anti-parallel
Strand 3
E
183 188anti-parallel
Strand 4
E
175 180anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il