Analysis of interatomic Contacts of Structural Units in PDB entry:
6RGM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6RGM entry

There is 1 chain in PDB entry 6RGM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1SER 296
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6RGM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 48Right-handed alpha
Helix 2
AA2
A
50 54Right-handed 310
Helix 3
AA3
A
56 71Right-handed alpha
Helix 4
AA4
A
75 91Right-handed alpha
Helix 5
AA5
A
193 200Right-handed alpha
Helix 6
AA6
A
200 222Right-handed alpha
Helix 7
AA7
A
226 242Right-handed alpha
Helix 8
AA8
A
271 275Right-handed 310
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There are 3 sheets in PDB entry 6RGM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 20first strand
Strand 2
A
27 40anti-parallel
Strand 3
A
94 104anti-parallel
Strand 4
A
127 135anti-parallel
Strand 5
A
139 153anti-parallel
Strand 6
A
178 188anti-parallel
Strand 7
A
245 254anti-parallel
Strand 8
A
286 292anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 111first strand
Strand 2
A
114 121anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 259first strand
Strand 2
A
278 280anti-parallel
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