Analysis of interatomic Contacts of Structural Units in PDB entry:
6RI7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6RI7 entry

There are 10 chains in PDB entry 6RI7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
N	A 5	A 36
T	T 4	T 35
F	MET 1	VAL 156
A	GLU 7	LEU 234
B	SER 4	VAL 232
C	VAL 2	GLU 1342
D	GLU 16	ARG 1373
E	ALA 2	GLU 74
R	G 5	G 14
G	MET 1	VAL 156

There are116 helices in PDB entry 6RI7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	F	7	24	Right-handed alpha
Helix 2	AA2	F	24	37	Right-handed alpha
Helix 3	AA3	F	45	72	Right-handed alpha
Helix 4	AA4	F	122	129	Right-handed alpha
Helix 5	AA5	A	34	50	Right-handed alpha
Helix 6	AA6	A	77	88	Right-handed alpha
Helix 7	AA7	A	113	115	Right-handed 310
Helix 8	AA8	A	154	162	Right-handed alpha
Helix 9	AA9	A	212	230	Right-handed alpha
Helix 10	AB1	B	34	50	Right-handed alpha
Helix 11	AB2	B	77	88	Right-handed alpha
Helix 12	AB3	B	113	115	Right-handed 310
Helix 13	AB4	B	154	162	Right-handed alpha
Helix 14	AB5	B	212	230	Right-handed alpha
Helix 15	AB6	C	4	9	Right-handed alpha
Helix 16	AB7	C	28	39	Right-handed alpha
Helix 17	AB8	C	48	57	Right-handed alpha
Helix 18	AB9	C	81	89	Right-handed alpha
Helix 19	AC1	C	206	213	Right-handed alpha
Helix 20	AC2	C	216	225	Right-handed alpha
Helix 21	AC3	C	242	246	Right-handed 310
Helix 22	AC4	C	270	281	Right-handed alpha
Helix 23	AC5	C	288	295	Right-handed 310
Helix 24	AC6	C	318	329	Right-handed alpha
Helix 25	AC7	C	345	354	Right-handed alpha
Helix 26	AC8	C	358	371	Right-handed alpha
Helix 27	AC9	C	377	390	Right-handed alpha
Helix 28	AD1	C	398	409	Right-handed alpha
Helix 29	AD2	C	421	437	Right-handed alpha
Helix 30	AD3	C	455	481	Right-handed alpha
Helix 31	AD4	C	488	493	Right-handed 310
Helix 32	AD5	C	494	508	Right-handed alpha
Helix 33	AD6	C	519	527	Right-handed alpha
Helix 34	AD7	C	607	613	Right-handed alpha
Helix 35	AD8	C	648	650	Right-handed 310
Helix 36	AD9	C	656	661	Right-handed 310
Helix 37	AE1	C	662	667	Right-handed alpha
Helix 38	AE2	C	670	674	Right-handed 310
Helix 39	AE3	C	675	688	Right-handed alpha
Helix 40	AE4	C	704	712	Right-handed alpha
Helix 41	AE5	C	819	826	Right-handed alpha
Helix 42	AE6	C	858	865	Right-handed alpha
Helix 43	AE7	C	942	979	Right-handed alpha
Helix 44	AE8	C	986	991	Right-handed alpha
Helix 45	AE9	C	1006	1038	Right-handed alpha
Helix 46	AF1	C	1081	1084	Right-handed 310
Helix 47	AF2	C	1099	1103	Right-handed 310
Helix 48	AF3	C	1109	1134	Right-handed alpha
Helix 49	AF4	C	1137	1151	Right-handed alpha
Helix 50	AF5	C	1165	1177	Right-handed alpha
Helix 51	AF6	C	1191	1202	Right-handed alpha
Helix 52	AF7	C	1238	1243	Right-handed alpha
Helix 53	AF8	C	1271	1281	Right-handed alpha
Helix 54	AF9	C	1284	1293	Right-handed alpha
Helix 55	AG1	C	1297	1310	Right-handed alpha
Helix 56	AG2	C	1320	1333	Right-handed alpha
Helix 57	AG3	D	26	34	Right-handed alpha
Helix 58	AG4	D	77	81	Right-handed 310
Helix 59	AG5	D	96	101	Right-handed alpha
Helix 60	AG6	D	113	118	Right-handed alpha
Helix 61	AG7	D	122	129	Right-handed alpha
Helix 62	AG8	D	131	140	Right-handed alpha
Helix 63	AG9	D	161	172	Right-handed alpha
Helix 64	AH1	D	181	192	Right-handed alpha
Helix 65	AH2	D	195	208	Right-handed alpha
Helix 66	AH3	D	210	230	Right-handed alpha
Helix 67	AH4	D	233	236	Right-handed 310
Helix 68	AH5	D	263	285	Right-handed alpha
Helix 69	AH6	D	288	309	Right-handed alpha
Helix 70	AH7	D	326	332	Right-handed alpha
Helix 71	AH8	D	336	342	Right-handed alpha
Helix 72	AH9	D	370	377	Right-handed alpha
Helix 73	AI1	D	377	389	Right-handed alpha
Helix 74	AI2	D	393	404	Right-handed alpha
Helix 75	AI3	D	405	417	Right-handed alpha
Helix 76	AI4	D	430	432	Right-handed 310
Helix 77	AI5	D	452	457	Right-handed alpha
Helix 78	AI6	D	473	484	Right-handed alpha
Helix 79	AI7	D	485	489	Right-handed 310
Helix 80	AI8	D	503	514	Right-handed alpha
Helix 81	AI9	D	529	540	Right-handed alpha
Helix 82	AJ1	D	574	581	Right-handed alpha
Helix 83	AJ2	D	588	593	Right-handed 310
Helix 84	AJ3	D	597	613	Right-handed alpha
Helix 85	AJ4	D	614	636	Right-handed alpha
Helix 86	AJ5	D	640	644	Right-handed 310
Helix 87	AJ6	D	648	670	Right-handed alpha
Helix 88	AJ7	D	674	703	Right-handed alpha
Helix 89	AJ8	D	720	728	Right-handed alpha
Helix 90	AJ9	D	733	742	Right-handed alpha
Helix 91	AK1	D	768	805	Right-handed alpha
Helix 92	AK2	D	834	840	Right-handed alpha
Helix 93	AK3	D	865	876	Right-handed alpha
Helix 94	AK4	D	884	888	Right-handed 310
Helix 95	AK5	D	914	925	Right-handed alpha
Helix 96	AK6	D	926	930	Right-handed 310
Helix 97	AK7	D	937	949	Right-handed alpha
Helix 98	AK8	D	1136	1147	Right-handed alpha
Helix 99	AK9	D	1216	1224	Right-handed alpha
Helix 100	AL1	D	1225	1245	Right-handed alpha
Helix 101	AL2	D	1249	1261	Right-handed alpha
Helix 102	AL3	D	1282	1295	Right-handed alpha
Helix 103	AL4	D	1308	1313	Right-handed alpha
Helix 104	AL5	D	1319	1324	Right-handed alpha
Helix 105	AL6	D	1328	1339	Right-handed alpha
Helix 106	AL7	D	1346	1354	Right-handed alpha
Helix 107	AL8	D	1360	1373	Right-handed alpha
Helix 108	AL9	E	6	13	Right-handed alpha
Helix 109	AM1	E	17	33	Right-handed alpha
Helix 110	AM2	E	45	56	Right-handed alpha
Helix 111	AM3	E	60	74	Right-handed alpha
Helix 112	AM4	G	7	24	Right-handed alpha
Helix 113	AM5	G	24	38	Right-handed alpha
Helix 114	AM6	G	45	71	Right-handed alpha
Helix 115	AM7	G	78	82	Right-handed 310
Helix 116	AM8	G	122	127	Right-handed alpha

There are 48 sheets in PDB entry 6RI7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	5	6	first strand
Strand 2	F	73	74	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	101	104	first strand
Strand 2	F	90	94	anti-parallel
Strand 3	F	144	154	anti-parallel
Strand 4	F	136	141	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	13	17	first strand
Strand 2	A	23	31	anti-parallel
Strand 3	A	199	207	anti-parallel
Strand 4	A	180	189	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	104	first strand
Strand 2	A	140	148	anti-parallel
Strand 3	A	54	61	anti-parallel
Strand 4	A	171	172	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	92	first strand
Strand 2	A	121	122	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	111	first strand
Strand 2	A	129	133	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	13	18	first strand
Strand 2	B	24	29	anti-parallel
Strand 3	B	198	207	anti-parallel
Strand 4	B	180	190	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	104	first strand
Strand 2	B	140	149	anti-parallel
Strand 3	B	53	61	anti-parallel
Strand 4	B	171	172	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	92	first strand
Strand 2	B	121	123	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	111	first strand
Strand 2	B	129	133	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	152	153	first strand
Strand 2	B	175	176	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	14	first strand
Strand 2	C	1182	1183	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	60	first strand
Strand 2	C	66	74	anti-parallel
Strand 3	C	93	104	anti-parallel
Strand 4	C	115	118	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	60	first strand
Strand 2	C	66	74	anti-parallel
Strand 3	C	93	104	anti-parallel
Strand 4	C	122	128	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	143	145	first strand
Strand 2	C	512	514	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	451	453	first strand
Strand 2	C	147	151	anti-parallel
Strand 3	C	530	531	parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	154	158	first strand
Strand 2	C	173	177	anti-parallel
Strand 3	C	184	187	anti-parallel
Strand 4	C	195	198	anti-parallel
Strand 5	C	204	205	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	227	231	first strand
Strand 2	C	332	336	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	255	257	first strand
Strand 2	C	260	263	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	301	303	first strand
Strand 2	C	308	311	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	580	581	first strand
Strand 2	C	587	594	anti-parallel
Strand 3	C	599	606	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	580	581	first strand
Strand 2	C	587	594	anti-parallel
Strand 3	C	652	653	anti-parallel
Strand 4	C	616	617	parallel
Strand 5	C	633	637	anti-parallel
Strand 6	C	642	646	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	716	717	first strand
Strand 2	C	782	785	anti-parallel
Strand 3	C	768	769	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	748	752	first strand
Strand 2	C	731	736	anti-parallel
Strand 3	C	722	726	anti-parallel
Strand 4	C	776	777	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	817	818	first strand
Strand 2	C	1096	1098	anti-parallel
Strand 3	C	798	804	parallel
Strand 4	C	1226	1234	anti-parallel
Strand 5	C	1065	1067	anti-parallel
Strand 6	C	1073	1075	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	834	838	first strand
Strand 2	C	1048	1055	anti-parallel
Strand 3	C	927	935	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	882	884	first strand
Strand 2	C	918	919	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	887	888	first strand
Strand 2	C	914	915	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1086	1087	first strand
Strand 2	C	1213	1214	anti-parallel
Strand 3	C	1219	1220	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1244	1246	first strand
Strand 2	D	350	356	anti-parallel
Strand 3	D	465	469	anti-parallel
Strand 4	D	421	425	anti-parallel
Strand 5	D	434	437	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1244	1246	first strand
Strand 2	D	350	356	anti-parallel
Strand 3	D	447	448	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1269	1270	first strand
Strand 2	D	345	346	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1335	1338	first strand
Strand 2	D	21	24	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	106	112	first strand
Strand 2	D	238	241	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	159	160	first strand
Strand 2	D	144	146	anti-parallel
Strand 3	D	178	179	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	366	369	first strand
Strand 2	D	439	442	parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	526	527	first strand
Strand 2	D	547	556	parallel
Strand 3	D	564	573	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	820	822	first strand
Strand 2	D	880	882	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	951	952	first strand
Strand 2	D	1015	1016	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	957	961	first strand
Strand 2	D	981	985	anti-parallel
Strand 3	D	991	996	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	965	967	first strand
Strand 2	D	973	975	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1034	1035	first strand
Strand 2	D	1080	1081	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1046	1048	first strand
Strand 2	D	1059	1061	anti-parallel
Strand 3	D	1105	1107	anti-parallel
Strand 4	D	1122	1123	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1077	1078	first strand
Strand 2	D	1099	1100	anti-parallel

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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1176	1178	first strand
Strand 2	D	1161	1164	anti-parallel
Strand 3	D	1203	1204	anti-parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1279	1281	first strand
Strand 2	D	1263	1268	anti-parallel
Strand 3	D	1301	1304	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	5	6	first strand
Strand 2	G	73	74	parallel

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There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	101	103	first strand
Strand 2	G	91	94	anti-parallel
Strand 3	G	144	152	anti-parallel
Strand 4	G	136	141	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6RI7

Analysis of interatomic Contacts of Structural Units in PDB entry:
6RI7