Analysis of interatomic Contacts of Structural Units in PDB entry:
6RIM

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6RIM entry

There are 3 chains in PDB entry 6RIM (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 2	VAL 457
B	ASP 2	VAL 457
C	ASP 2	HIS 361

There are112 helices in PDB entry 6RIM. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	25	29	Right-handed 310
Helix 2	AA2	A	100	126	Right-handed alpha
Helix 3	AA3	A	126	139	Right-handed alpha
Helix 4	AA4	A	243	260	Right-handed alpha
Helix 5	AA5	A	273	275	Right-handed 310
Helix 6	AA6	A	294	301	Right-handed alpha
Helix 7	AA7	A	302	305	Right-handed 310
Helix 8	AA8	A	308	326	Right-handed alpha
Helix 9	AA9	A	331	335	Right-handed 310
Helix 10	AB1	A	338	349	Right-handed alpha
Helix 11	AB2	A	356	368	Right-handed alpha
Helix 12	AB3	A	381	392	Right-handed alpha
Helix 13	AB4	A	396	405	Right-handed alpha
Helix 14	AB5	A	446	450	Right-handed 310
Helix 15	AB6	B	25	29	Right-handed 310
Helix 16	AB7	B	100	124	Right-handed alpha
Helix 17	AB8	B	126	139	Right-handed alpha
Helix 18	AB9	B	243	261	Right-handed alpha
Helix 19	AC1	B	273	275	Right-handed 310
Helix 20	AC2	B	294	301	Right-handed alpha
Helix 21	AC3	B	302	305	Right-handed 310
Helix 22	AC4	B	308	326	Right-handed alpha
Helix 23	AC5	B	331	335	Right-handed 310
Helix 24	AC6	B	338	349	Right-handed alpha
Helix 25	AC7	B	356	368	Right-handed alpha
Helix 26	AC8	B	381	392	Right-handed alpha
Helix 27	AC9	B	396	405	Right-handed alpha
Helix 28	AD1	B	446	450	Right-handed 310
Helix 29	AD2	C	25	29	Right-handed 310
Helix 30	AD3	C	100	126	Right-handed alpha
Helix 31	AD4	C	126	139	Right-handed alpha
Helix 32	AD5	C	243	260	Right-handed alpha
Helix 33	AD6	C	273	275	Right-handed 310
Helix 34	AD7	C	294	301	Right-handed alpha
Helix 35	AD8	C	302	305	Right-handed 310
Helix 36	AD9	C	308	326	Right-handed alpha
Helix 37	AE1	C	331	335	Right-handed 310
Helix 38	AE2	C	338	349	Right-handed alpha
Helix 39	AE3	C	356	368	Right-handed alpha
Helix 40	AE4	C	381	392	Right-handed alpha
Helix 41	AE5	C	396	405	Right-handed alpha
Helix 42	AE6	C	446	450	Right-handed 310
Helix 43	AE7	D	25	29	Right-handed 310
Helix 44	AE8	D	100	124	Right-handed alpha
Helix 45	AE9	D	126	139	Right-handed alpha
Helix 46	AF1	D	243	261	Right-handed alpha
Helix 47	AF2	D	273	277	Right-handed 310
Helix 48	AF3	D	293	301	Right-handed alpha
Helix 49	AF4	D	302	305	Right-handed 310
Helix 50	AF5	D	308	326	Right-handed alpha
Helix 51	AF6	D	331	335	Right-handed 310
Helix 52	AF7	D	338	349	Right-handed alpha
Helix 53	AF8	D	356	368	Right-handed alpha
Helix 54	AF9	D	381	392	Right-handed alpha
Helix 55	AG1	D	396	405	Right-handed alpha
Helix 56	AG2	D	446	450	Right-handed 310
Helix 57	AG3	E	25	29	Right-handed 310
Helix 58	AG4	E	100	126	Right-handed alpha
Helix 59	AG5	E	126	139	Right-handed alpha
Helix 60	AG6	E	243	261	Right-handed alpha
Helix 61	AG7	E	273	275	Right-handed 310
Helix 62	AG8	E	294	301	Right-handed alpha
Helix 63	AG9	E	302	305	Right-handed 310
Helix 64	AH1	E	308	326	Right-handed alpha
Helix 65	AH2	E	331	335	Right-handed 310
Helix 66	AH3	E	338	349	Right-handed alpha
Helix 67	AH4	E	356	368	Right-handed alpha
Helix 68	AH5	E	381	392	Right-handed alpha
Helix 69	AH6	E	396	405	Right-handed alpha
Helix 70	AH7	E	446	450	Right-handed 310
Helix 71	AH8	F	25	29	Right-handed 310
Helix 72	AH9	F	100	124	Right-handed alpha
Helix 73	AI1	F	126	139	Right-handed alpha
Helix 74	AI2	F	243	261	Right-handed alpha
Helix 75	AI3	F	273	275	Right-handed 310
Helix 76	AI4	F	294	301	Right-handed alpha
Helix 77	AI5	F	302	305	Right-handed 310
Helix 78	AI6	F	308	326	Right-handed alpha
Helix 79	AI7	F	331	335	Right-handed 310
Helix 80	AI8	F	338	349	Right-handed alpha
Helix 81	AI9	F	356	368	Right-handed alpha
Helix 82	AJ1	F	381	392	Right-handed alpha
Helix 83	AJ2	F	396	405	Right-handed alpha
Helix 84	AJ3	F	446	450	Right-handed 310
Helix 85	AJ4	G	25	29	Right-handed 310
Helix 86	AJ5	G	100	124	Right-handed alpha
Helix 87	AJ6	G	126	139	Right-handed alpha
Helix 88	AJ7	G	243	260	Right-handed alpha
Helix 89	AJ8	G	273	275	Right-handed 310
Helix 90	AJ9	G	294	301	Right-handed alpha
Helix 91	AK1	G	302	305	Right-handed 310
Helix 92	AK2	G	308	326	Right-handed alpha
Helix 93	AK3	G	331	335	Right-handed 310
Helix 94	AK4	G	338	349	Right-handed alpha
Helix 95	AK5	G	356	368	Right-handed alpha
Helix 96	AK6	G	381	392	Right-handed alpha
Helix 97	AK7	G	396	405	Right-handed alpha
Helix 98	AK8	G	446	450	Right-handed 310
Helix 99	AK9	H	25	29	Right-handed 310
Helix 100	AL1	H	100	124	Right-handed alpha
Helix 101	AL2	H	126	139	Right-handed alpha
Helix 102	AL3	H	243	261	Right-handed alpha
Helix 103	AL4	H	273	275	Right-handed 310
Helix 104	AL5	H	294	301	Right-handed alpha
Helix 105	AL6	H	302	305	Right-handed 310
Helix 106	AL7	H	308	326	Right-handed alpha
Helix 107	AL8	H	331	335	Right-handed 310
Helix 108	AL9	H	338	349	Right-handed alpha
Helix 109	AM1	H	356	368	Right-handed alpha
Helix 110	AM2	H	381	392	Right-handed alpha
Helix 111	AM3	H	396	405	Right-handed alpha
Helix 112	AM4	H	446	450	Right-handed 310

There are 55 sheets in PDB entry 6RIM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	31	41	first strand
Strand 2	A	47	60	anti-parallel
Strand 3	A	63	65	anti-parallel
Strand 4	A	185	188	parallel
Strand 5	A	219	222	parallel
Strand 6	A	200	203	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	82	first strand
Strand 2	A	86	87	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	161	167	first strand
Strand 2	A	174	182	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	239	241	first strand
Strand 2	A	227	232	anti-parallel
Strand 3	A	423	425	anti-parallel
Strand 4	A	451	452	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	277	278	first strand
Strand 2	A	292	293	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	370	372	first strand
Strand 2	A	377	379	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	436	437	first strand
Strand 2	A	441	442	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	31	41	first strand
Strand 2	B	47	60	anti-parallel
Strand 3	B	63	65	anti-parallel
Strand 4	B	185	188	parallel
Strand 5	B	219	222	parallel
Strand 6	B	200	203	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	81	82	first strand
Strand 2	B	86	87	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	161	167	first strand
Strand 2	B	174	182	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	240	241	first strand
Strand 2	B	227	231	anti-parallel
Strand 3	B	423	425	anti-parallel
Strand 4	B	451	452	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	277	278	first strand
Strand 2	B	292	293	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	370	372	first strand
Strand 2	B	377	379	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	436	437	first strand
Strand 2	B	441	442	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	31	42	first strand
Strand 2	C	45	60	anti-parallel
Strand 3	C	63	65	anti-parallel
Strand 4	C	185	188	parallel
Strand 5	C	219	222	parallel
Strand 6	C	200	203	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	81	82	first strand
Strand 2	C	86	87	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	161	167	first strand
Strand 2	C	174	182	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	240	241	first strand
Strand 2	C	227	231	anti-parallel
Strand 3	C	423	425	anti-parallel
Strand 4	C	451	452	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	277	278	first strand
Strand 2	C	292	293	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	370	372	first strand
Strand 2	C	377	379	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	436	437	first strand
Strand 2	C	441	442	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	31	40	first strand
Strand 2	D	48	60	anti-parallel
Strand 3	D	63	65	anti-parallel
Strand 4	D	185	188	parallel
Strand 5	D	219	222	parallel
Strand 6	D	200	203	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	81	82	first strand
Strand 2	D	86	87	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	161	167	first strand
Strand 2	D	174	182	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	240	241	first strand
Strand 2	D	227	231	anti-parallel
Strand 3	D	423	425	anti-parallel
Strand 4	D	451	452	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	370	372	first strand
Strand 2	D	377	379	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	436	437	first strand
Strand 2	D	441	442	anti-parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	31	41	first strand
Strand 2	E	47	60	anti-parallel
Strand 3	E	63	65	anti-parallel
Strand 4	E	185	188	parallel
Strand 5	E	219	222	parallel
Strand 6	E	200	203	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	81	82	first strand
Strand 2	E	86	87	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	161	167	first strand
Strand 2	E	174	182	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	239	241	first strand
Strand 2	E	227	232	anti-parallel
Strand 3	E	423	425	anti-parallel
Strand 4	E	451	452	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	277	281	first strand
Strand 2	E	289	293	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	370	372	first strand
Strand 2	E	377	379	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	436	437	first strand
Strand 2	E	441	442	anti-parallel

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There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	31	41	first strand
Strand 2	F	47	60	anti-parallel
Strand 3	F	63	65	anti-parallel
Strand 4	F	185	188	parallel
Strand 5	F	219	222	parallel
Strand 6	F	200	203	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	86	87	first strand
Strand 2	F	81	82	anti-parallel
Strand 3	F	457	458	parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	161	167	first strand
Strand 2	F	174	182	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	239	241	first strand
Strand 2	F	227	232	anti-parallel
Strand 3	F	423	425	anti-parallel
Strand 4	F	451	452	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	277	281	first strand
Strand 2	F	289	293	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	370	372	first strand
Strand 2	F	377	379	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	436	437	first strand
Strand 2	F	441	442	anti-parallel

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There are 6 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	31	41	first strand
Strand 2	G	47	60	anti-parallel
Strand 3	G	63	65	anti-parallel
Strand 4	G	185	188	parallel
Strand 5	G	219	222	parallel
Strand 6	G	200	203	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	81	82	first strand
Strand 2	G	86	87	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	161	167	first strand
Strand 2	G	174	182	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	240	241	first strand
Strand 2	G	227	231	anti-parallel
Strand 3	G	423	425	anti-parallel
Strand 4	G	451	452	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	277	281	first strand
Strand 2	G	289	293	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	370	372	first strand
Strand 2	G	377	379	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	436	437	first strand
Strand 2	G	441	442	anti-parallel

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There are 6 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	31	41	first strand
Strand 2	H	47	60	anti-parallel
Strand 3	H	63	65	anti-parallel
Strand 4	H	185	188	parallel
Strand 5	H	219	222	parallel
Strand 6	H	200	203	anti-parallel

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There are 3 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	86	87	first strand
Strand 2	H	81	82	anti-parallel
Strand 3	H	457	458	parallel

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There are 2 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	161	167	first strand
Strand 2	H	174	182	anti-parallel

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There are 4 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	239	241	first strand
Strand 2	H	227	232	anti-parallel
Strand 3	H	423	425	anti-parallel
Strand 4	H	451	452	anti-parallel

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There are 2 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	277	281	first strand
Strand 2	H	289	293	anti-parallel

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There are 2 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	370	372	first strand
Strand 2	H	377	379	anti-parallel

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There are 2 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	436	437	first strand
Strand 2	H	441	442	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6RIM

Analysis of interatomic Contacts of Structural Units in PDB entry:
6RIM