Analysis of interatomic Contacts of Structural Units in PDB entry:
6RIV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6RIV entry

There are 4 chains in PDB entry 6RIV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 MET 1GLN 119
B
 LEU 121PRO 217
A
 MET 1GLN 119
A
 LEU 121PRO 217
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6RIV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
12 26Right-handed alpha
Helix 2
AA2
B
35 42Right-handed 310
Helix 3
AA3
B
43 48Right-handed alpha
Helix 4
AA4
B
67 79Right-handed alpha
Helix 5
AA5
B
91 108Right-handed alpha
Helix 6
AA6
B
108 121Right-handed alpha
Helix 7
AA7
B
121 126Right-handed alpha
Helix 8
AA8
B
132 157Right-handed alpha
Helix 9
AA9
B
166 180Right-handed alpha
Helix 10
AB1
B
184 190Right-handed 310
Helix 11
AB2
B
191 203Right-handed alpha
Helix 12
AB3
B
204 214Right-handed alpha
Helix 13
AB4
A
12 26Right-handed alpha
Helix 14
AB5
A
35 42Right-handed 310
Helix 15
AB6
A
43 48Right-handed alpha
Helix 16
AB7
A
67 79Right-handed alpha
Helix 17
AB8
A
91 108Right-handed alpha
Helix 18
AB9
A
108 121Right-handed alpha
Helix 19
AC1
A
121 127Right-handed alpha
Helix 20
AC2
A
132 157Right-handed alpha
Helix 21
AC3
A
166 172Right-handed alpha
Helix 22
AC4
A
172 180Right-handed alpha
Helix 23
AC5
A
184 190Right-handed 310
Helix 24
AC6
A
191 203Right-handed alpha
Helix 25
AC7
A
204 214Right-handed alpha
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There are 2 sheets in PDB entry 6RIV. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 32first strand
Strand 2
B
4 7parallel
Strand 3
B
57 60anti-parallel
Strand 4
B
63 66anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 32first strand
Strand 2
A
4 7parallel
Strand 3
A
57 60anti-parallel
Strand 4
A
63 66anti-parallel
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