Analysis of interatomic Contacts of Structural Units in PDB entry:
6RIW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6RIW entry

There is 1 chain in PDB entry 6RIW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 968
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 6RIW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 28Right-handed alpha
Helix 2
AA2
A
37 42Right-handed alpha
Helix 3
AA3
A
44 49Right-handed 310
Helix 4
AA4
A
79 85Right-handed alpha
Helix 5
AA5
A
87 105Right-handed alpha
Helix 6
AA6
A
109 113Right-handed 310
Helix 7
AA7
A
128 149Right-handed alpha
Helix 8
AA8
A
165 170Right-handed 310
Helix 9
AA9
A
173 184Right-handed alpha
Helix 10
AB1
A
194 196Right-handed 310
Helix 11
AB2
A
197 212Right-handed alpha
Helix 12
AB3
A
227 238Right-handed alpha
Helix 13
AB4
A
271 278Right-handed alpha
Helix 14
AB5
A
303 319Right-handed alpha
Helix 15
AB6
A
321 325Right-handed 310
Helix 16
AB7
A
335 351Right-handed alpha
Helix 17
AB8
A
352 354Right-handed 310
Helix 18
AB9
A
362 367Right-handed alpha
Helix 19
AC1
A
369 372Right-handed 310
Helix 20
AC2
A
373 388Right-handed alpha
Helix 21
AC3
A
408 412Right-handed 310
Helix 22
AC4
A
483 493Right-handed alpha
Helix 23
AC5
A
508 511Right-handed 310
Helix 24
AC6
A
512 520Right-handed alpha
Helix 25
AC7
A
537 541Right-handed alpha
Helix 26
AC8
A
551 568Right-handed alpha
Helix 27
AC9
A
585 587Right-handed 310
Helix 28
AD1
A
588 596Right-handed alpha
Helix 29
AD2
A
596 609Right-handed alpha
Helix 30
AD3
A
613 629Right-handed alpha
Helix 31
AD4
A
633 639Right-handed alpha
Helix 32
AD5
A
641 654Right-handed alpha
Helix 33
AD6
A
664 666Right-handed 310
Helix 34
AD7
A
667 683Right-handed alpha
Helix 35
AD8
A
698 707Right-handed alpha
Helix 36
AD9
A
732 736Right-handed 310
Helix 37
AE1
A
754 756Right-handed 310
Helix 38
AE2
A
757 761Right-handed 310
Helix 39
AE3
A
775 791Right-handed alpha
Helix 40
AE4
A
793 795Right-handed 310
Helix 41
AE5
A
807 822Right-handed alpha
Helix 42
AE6
A
830 835Right-handed alpha
Helix 43
AE7
A
837 839Right-handed 310
Helix 44
AE8
A
840 855Right-handed alpha
Helix 45
AE9
A
916 923Right-handed alpha
Helix 46
AF1
A
928 935Right-handed alpha
Helix 47
AF2
A
950 954Right-handed 310
Helix 48
AF3
A
960 964Right-handed 310
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There are 5 sheets in PDB entry 6RIW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 20 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
358 360first strand
Strand 2
A
327 329parallel
Strand 3
A
432 439parallel
Strand 4
A
443 450anti-parallel
Strand 5
A
283 292anti-parallel
Strand 6
A
4 12anti-parallel
Strand 7
A
262 270anti-parallel
Strand 8
A
217 224anti-parallel
Strand 9
A
115 120parallel
Strand 10
A
189 193parallel
Strand 11
A
659 663anti-parallel
Strand 12
A
576 581parallel
Strand 13
A
687 694parallel
Strand 14
A
744 752anti-parallel
Strand 15
A
469 478anti-parallel
Strand 16
A
763 772anti-parallel
Strand 17
A
876 884anti-parallel
Strand 18
A
865 870anti-parallel
Strand 19
A
797 801parallel
Strand 20
A
826 828parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 35first strand
Strand 2
A
62 64anti-parallel
Strand 3
A
259 260parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
389 390first strand
Strand 2
A
417 418anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
527 528first strand
Strand 2
A
741 742parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
532 536first strand
Strand 2
A
907 911anti-parallel
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