Analysis of interatomic Contacts of Structural Units in PDB entry:
6RJ8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6RJ8 entry

There is 1 chain in PDB entry 6RJ8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 9LYS 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 6RJ8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
93 108Right-handed alpha
Helix 2
AA2
A
125 140Right-handed alpha
Helix 3
AA3
A
145 151Right-handed 310
Helix 4
AA4
A
156 162Right-handed alpha
Helix 5
AA5
A
174 190Right-handed alpha
Helix 6
AA6
A
192 196Right-handed 310
Helix 7
AA7
A
217 222Right-handed alpha
Helix 8
AA8
A
222 232Right-handed alpha
Helix 9
AA9
A
237 241Right-handed 310
Helix 10
AB1
A
253 257Right-handed 310
Helix 11
AB2
A
270 285Right-handed alpha
Helix 12
AB3
A
299 305Right-handed 310
Helix 13
AB4
A
308 324Right-handed alpha
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There are 2 sheets in PDB entry 6RJ8. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 15first strand
Strand 2
A
19 22anti-parallel
Strand 3
A
27 28anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 53first strand
Strand 2
A
59 64anti-parallel
Strand 3
A
110 115anti-parallel
Strand 4
A
75 81parallel
Strand 5
A
163 173parallel
Strand 6
A
200 204parallel
Strand 7
A
261 267parallel
Strand 8
A
290 296parallel
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