Analysis of interatomic Contacts of Structural Units in PDB entry:
6RL5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6RL5 entry

There are 8 chains in PDB entry 6RL5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 5	GLY 421
B	THR 3	GLY 421
C	THR 3	GLY 421
D	GLN 4	PHE 420
E	GLN 4	GLY 421
F	ILE 5	GLY 421
G	GLN 2	ALA 423
H	GLN 4	PHE 420

There are138 helices in PDB entry 6RL5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	20	Right-handed alpha
Helix 2	AA2	A	44	49	Right-handed alpha
Helix 3	AA3	A	56	69	Right-handed alpha
Helix 4	AA4	A	80	94	Right-handed alpha
Helix 5	AA5	A	95	99	Right-handed 310
Helix 6	AA6	A	110	127	Right-handed alpha
Helix 7	AA7	A	142	147	Right-handed alpha
Helix 8	AA8	A	151	157	Right-handed alpha
Helix 9	AA9	A	180	190	Right-handed alpha
Helix 10	AB1	A	217	230	Right-handed alpha
Helix 11	AB2	A	251	257	Right-handed 310
Helix 12	AB3	A	266	271	Right-handed 310
Helix 13	AB4	A	283	286	Right-handed 310
Helix 14	AB5	A	300	315	Right-handed alpha
Helix 15	AB6	A	318	345	Right-handed alpha
Helix 16	AB7	A	364	378	Right-handed alpha
Helix 17	AB8	A	401	420	Right-handed alpha
Helix 18	AB9	B	4	10	Right-handed alpha
Helix 19	AC1	B	15	20	Right-handed alpha
Helix 20	AC2	B	44	49	Right-handed alpha
Helix 21	AC3	B	56	69	Right-handed alpha
Helix 22	AC4	B	81	94	Right-handed alpha
Helix 23	AC5	B	95	99	Right-handed 310
Helix 24	AC6	B	110	127	Right-handed alpha
Helix 25	AC7	B	142	147	Right-handed alpha
Helix 26	AC8	B	151	156	Right-handed alpha
Helix 27	AC9	B	181	191	Right-handed alpha
Helix 28	AD1	B	217	230	Right-handed alpha
Helix 29	AD2	B	251	257	Right-handed 310
Helix 30	AD3	B	266	270	Right-handed 310
Helix 31	AD4	B	283	286	Right-handed 310
Helix 32	AD5	B	300	316	Right-handed alpha
Helix 33	AD6	B	318	345	Right-handed alpha
Helix 34	AD7	B	364	378	Right-handed alpha
Helix 35	AD8	B	401	420	Right-handed alpha
Helix 36	AD9	C	15	20	Right-handed alpha
Helix 37	AE1	C	44	49	Right-handed alpha
Helix 38	AE2	C	56	69	Right-handed alpha
Helix 39	AE3	C	80	94	Right-handed alpha
Helix 40	AE4	C	95	99	Right-handed 310
Helix 41	AE5	C	110	127	Right-handed alpha
Helix 42	AE6	C	142	147	Right-handed alpha
Helix 43	AE7	C	151	156	Right-handed alpha
Helix 44	AE8	C	180	190	Right-handed alpha
Helix 45	AE9	C	217	231	Right-handed alpha
Helix 46	AF1	C	251	257	Right-handed 310
Helix 47	AF2	C	283	286	Right-handed 310
Helix 48	AF3	C	295	299	Right-handed 310
Helix 49	AF4	C	300	315	Right-handed alpha
Helix 50	AF5	C	318	345	Right-handed alpha
Helix 51	AF6	C	364	378	Right-handed alpha
Helix 52	AF7	C	401	421	Right-handed alpha
Helix 53	AF8	D	5	9	Right-handed alpha
Helix 54	AF9	D	44	49	Right-handed alpha
Helix 55	AG1	D	56	69	Right-handed alpha
Helix 56	AG2	D	81	94	Right-handed alpha
Helix 57	AG3	D	95	99	Right-handed 310
Helix 58	AG4	D	110	127	Right-handed alpha
Helix 59	AG5	D	144	149	Right-handed 310
Helix 60	AG6	D	151	156	Right-handed alpha
Helix 61	AG7	D	180	191	Right-handed alpha
Helix 62	AG8	D	217	231	Right-handed alpha
Helix 63	AG9	D	251	257	Right-handed 310
Helix 64	AH1	D	283	286	Right-handed 310
Helix 65	AH2	D	300	316	Right-handed alpha
Helix 66	AH3	D	318	344	Right-handed alpha
Helix 67	AH4	D	364	378	Right-handed alpha
Helix 68	AH5	D	401	420	Right-handed alpha
Helix 69	AH6	E	5	10	Right-handed alpha
Helix 70	AH7	E	15	20	Right-handed alpha
Helix 71	AH8	E	44	49	Right-handed alpha
Helix 72	AH9	E	56	69	Right-handed alpha
Helix 73	AI1	E	81	94	Right-handed alpha
Helix 74	AI2	E	95	99	Right-handed 310
Helix 75	AI3	E	110	127	Right-handed alpha
Helix 76	AI4	E	142	147	Right-handed alpha
Helix 77	AI5	E	151	156	Right-handed alpha
Helix 78	AI6	E	180	191	Right-handed alpha
Helix 79	AI7	E	217	232	Right-handed alpha
Helix 80	AI8	E	251	257	Right-handed 310
Helix 81	AI9	E	283	286	Right-handed 310
Helix 82	AJ1	E	295	299	Right-handed 310
Helix 83	AJ2	E	300	316	Right-handed alpha
Helix 84	AJ3	E	318	345	Right-handed alpha
Helix 85	AJ4	E	364	378	Right-handed alpha
Helix 86	AJ5	E	401	420	Right-handed alpha
Helix 87	AJ6	F	15	20	Right-handed alpha
Helix 88	AJ7	F	44	49	Right-handed alpha
Helix 89	AJ8	F	56	69	Right-handed alpha
Helix 90	AJ9	F	81	94	Right-handed alpha
Helix 91	AK1	F	95	99	Right-handed 310
Helix 92	AK2	F	110	127	Right-handed alpha
Helix 93	AK3	F	142	147	Right-handed alpha
Helix 94	AK4	F	151	156	Right-handed alpha
Helix 95	AK5	F	157	159	Right-handed 310
Helix 96	AK6	F	181	191	Right-handed alpha
Helix 97	AK7	F	217	231	Right-handed alpha
Helix 98	AK8	F	251	257	Right-handed 310
Helix 99	AK9	F	266	271	Right-handed 310
Helix 100	AL1	F	283	286	Right-handed 310
Helix 101	AL2	F	300	315	Right-handed alpha
Helix 102	AL3	F	318	345	Right-handed alpha
Helix 103	AL4	F	364	378	Right-handed alpha
Helix 104	AL5	F	401	421	Right-handed alpha
Helix 105	AL6	G	3	9	Right-handed alpha
Helix 106	AL7	G	15	20	Right-handed alpha
Helix 107	AL8	G	44	49	Right-handed alpha
Helix 108	AL9	G	56	69	Right-handed alpha
Helix 109	AM1	G	81	94	Right-handed alpha
Helix 110	AM2	G	95	99	Right-handed 310
Helix 111	AM3	G	110	127	Right-handed alpha
Helix 112	AM4	G	142	147	Right-handed alpha
Helix 113	AM5	G	151	156	Right-handed alpha
Helix 114	AM6	G	181	190	Right-handed alpha
Helix 115	AM7	G	217	230	Right-handed alpha
Helix 116	AM8	G	251	255	Right-handed 310
Helix 117	AM9	G	266	270	Right-handed 310
Helix 118	AN1	G	283	286	Right-handed 310
Helix 119	AN2	G	300	316	Right-handed alpha
Helix 120	AN3	G	318	345	Right-handed alpha
Helix 121	AN4	G	364	378	Right-handed alpha
Helix 122	AN5	G	401	420	Right-handed alpha
Helix 123	AN6	H	44	49	Right-handed alpha
Helix 124	AN7	H	56	69	Right-handed alpha
Helix 125	AN8	H	81	94	Right-handed alpha
Helix 126	AN9	H	95	99	Right-handed 310
Helix 127	AO1	H	110	127	Right-handed alpha
Helix 128	AO2	H	142	147	Right-handed alpha
Helix 129	AO3	H	151	157	Right-handed alpha
Helix 130	AO4	H	180	191	Right-handed alpha
Helix 131	AO5	H	217	231	Right-handed alpha
Helix 132	AO6	H	251	257	Right-handed 310
Helix 133	AO7	H	283	286	Right-handed 310
Helix 134	AO8	H	295	299	Right-handed 310
Helix 135	AO9	H	300	316	Right-handed alpha
Helix 136	AP1	H	318	345	Right-handed alpha
Helix 137	AP2	H	364	378	Right-handed alpha
Helix 138	AP3	H	401	420	Right-handed alpha

There are 32 sheets in PDB entry 6RL5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	380	381	first strand
Strand 2	A	39	42	parallel
Strand 3	A	31	34	anti-parallel
Strand 4	A	23	28	anti-parallel
Strand 5	B	79	80	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	103	105	first strand
Strand 2	A	278	281	anti-parallel
Strand 3	A	262	265	anti-parallel
Strand 4	A	234	238	parallel
Strand 5	A	199	204	parallel
Strand 6	A	130	134	parallel
Strand 7	A	166	169	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	207	208	first strand
Strand 2	A	214	215	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	350	354	first strand
Strand 2	A	357	361	anti-parallel
Strand 3	A	391	394	anti-parallel
Strand 4	A	383	385	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	24	28	first strand
Strand 2	B	31	34	anti-parallel
Strand 3	B	39	42	anti-parallel
Strand 4	B	380	381	parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	103	105	first strand
Strand 2	B	278	281	anti-parallel
Strand 3	B	262	265	anti-parallel
Strand 4	B	234	238	parallel
Strand 5	B	199	204	parallel
Strand 6	B	130	134	parallel
Strand 7	B	166	169	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	207	208	first strand
Strand 2	B	214	215	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	349	354	first strand
Strand 2	B	357	362	anti-parallel
Strand 3	B	391	394	anti-parallel
Strand 4	B	383	385	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	380	381	first strand
Strand 2	C	39	42	parallel
Strand 3	C	31	34	anti-parallel
Strand 4	C	23	28	anti-parallel
Strand 5	D	79	80	parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	103	105	first strand
Strand 2	C	278	281	anti-parallel
Strand 3	C	262	265	anti-parallel
Strand 4	C	234	238	parallel
Strand 5	C	201	204	parallel
Strand 6	C	131	134	parallel
Strand 7	C	166	169	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	207	208	first strand
Strand 2	C	214	215	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	350	354	first strand
Strand 2	C	357	361	anti-parallel
Strand 3	C	391	394	anti-parallel
Strand 4	C	384	385	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	24	28	first strand
Strand 2	D	31	34	anti-parallel
Strand 3	D	39	42	anti-parallel
Strand 4	D	380	381	parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	103	105	first strand
Strand 2	D	278	281	anti-parallel
Strand 3	D	262	265	anti-parallel
Strand 4	D	234	238	parallel
Strand 5	D	201	204	parallel
Strand 6	D	131	134	parallel
Strand 7	D	166	169	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	207	208	first strand
Strand 2	D	214	215	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	350	354	first strand
Strand 2	D	357	361	anti-parallel
Strand 3	D	391	394	anti-parallel
Strand 4	D	384	385	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	380	381	first strand
Strand 2	E	39	42	parallel
Strand 3	E	31	34	anti-parallel
Strand 4	E	23	28	anti-parallel
Strand 5	F	79	80	parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	79	80	first strand
Strand 2	F	23	28	parallel
Strand 3	F	31	34	anti-parallel
Strand 4	F	39	42	anti-parallel
Strand 5	F	380	381	parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	103	105	first strand
Strand 2	E	278	281	anti-parallel
Strand 3	E	262	265	anti-parallel
Strand 4	E	234	238	parallel
Strand 5	E	201	204	parallel
Strand 6	E	131	134	parallel
Strand 7	E	166	169	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	207	208	first strand
Strand 2	E	214	215	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	350	354	first strand
Strand 2	E	357	361	anti-parallel
Strand 3	E	391	394	anti-parallel
Strand 4	E	384	385	anti-parallel

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There are 7 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	103	105	first strand
Strand 2	F	278	281	anti-parallel
Strand 3	F	262	265	anti-parallel
Strand 4	F	234	238	parallel
Strand 5	F	199	204	parallel
Strand 6	F	130	134	parallel
Strand 7	F	166	169	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	207	208	first strand
Strand 2	F	214	215	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	350	354	first strand
Strand 2	F	357	361	anti-parallel
Strand 3	F	391	394	anti-parallel
Strand 4	F	383	385	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	380	381	first strand
Strand 2	G	39	42	parallel
Strand 3	G	31	34	anti-parallel
Strand 4	G	23	28	anti-parallel
Strand 5	H	79	80	parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	79	80	first strand
Strand 2	H	23	28	parallel
Strand 3	H	31	34	anti-parallel
Strand 4	H	39	42	anti-parallel
Strand 5	H	380	381	parallel

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There are 7 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	103	105	first strand
Strand 2	G	278	281	anti-parallel
Strand 3	G	262	265	anti-parallel
Strand 4	G	234	238	parallel
Strand 5	G	201	204	parallel
Strand 6	G	131	134	parallel
Strand 7	G	166	169	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	207	208	first strand
Strand 2	G	214	215	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	350	354	first strand
Strand 2	G	357	361	anti-parallel
Strand 3	G	391	394	anti-parallel
Strand 4	G	383	385	anti-parallel

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There are 7 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	103	105	first strand
Strand 2	H	278	281	anti-parallel
Strand 3	H	262	265	anti-parallel
Strand 4	H	234	238	parallel
Strand 5	H	201	204	parallel
Strand 6	H	131	134	parallel
Strand 7	H	166	169	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	207	208	first strand
Strand 2	H	214	215	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	350	354	first strand
Strand 2	H	357	361	anti-parallel
Strand 3	H	391	394	anti-parallel
Strand 4	H	383	385	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6RL5

Analysis of interatomic Contacts of Structural Units in PDB entry:
6RL5