Analysis of interatomic Contacts of Structural Units in PDB entry:
6RLB

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6RLB entry

There are 14 chains in PDB entry 6RLB (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 10	GLU 1034
B	LYS 10	SER 937
C	LYS 526	GLN 1055
D	ILE 58	VAL 534
E	GLU 4	SER 343
F	GLU 4	SER 343
G	GLU 604	THR 696
H	GLU 511	THR 603
I	ARG 4	GLY 89
J	ARG 4	GLY 89
K	ARG 4	GLY 89
L	ARG 4	GLY 89
M	ARG 4	GLY 89
N	ARG 4	GLY 89

There are126 helices in PDB entry 6RLB. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	11	22	Right-handed alpha
Helix 2	AA2	A	35	45	Right-handed alpha
Helix 3	AA3	A	105	123	Right-handed alpha
Helix 4	AA4	A	130	150	Right-handed alpha
Helix 5	AA5	A	192	210	Right-handed alpha
Helix 6	AA6	A	211	215	Right-handed 310
Helix 7	AA7	A	216	235	Right-handed alpha
Helix 8	AA8	A	244	269	Right-handed alpha
Helix 9	AA9	A	276	309	Right-handed alpha
Helix 10	AB1	A	322	347	Right-handed alpha
Helix 11	AB2	A	348	350	Right-handed 310
Helix 12	AB3	A	351	367	Right-handed alpha
Helix 13	AB4	A	378	409	Right-handed alpha
Helix 14	AB5	A	413	424	Right-handed alpha
Helix 15	AB6	A	424	429	Right-handed alpha
Helix 16	AB7	A	430	437	Right-handed alpha
Helix 17	AB8	A	437	461	Right-handed alpha
Helix 18	AB9	A	481	507	Right-handed alpha
Helix 19	AC1	A	510	550	Right-handed alpha
Helix 20	AC2	A	575	592	Right-handed alpha
Helix 21	AC3	A	597	632	Right-handed alpha
Helix 22	AC4	A	636	656	Right-handed alpha
Helix 23	AC5	A	656	661	Right-handed alpha
Helix 24	AC6	A	662	667	Right-handed alpha
Helix 25	AC7	A	668	707	Right-handed alpha
Helix 26	AC8	A	714	734	Right-handed alpha
Helix 27	AC9	A	738	768	Right-handed alpha
Helix 28	AD1	A	791	808	Right-handed alpha
Helix 29	AD2	A	822	827	Right-handed alpha
Helix 30	AD3	A	827	832	Right-handed alpha
Helix 31	AD4	A	834	861	Right-handed alpha
Helix 32	AD5	A	867	876	Right-handed alpha
Helix 33	AD6	A	878	897	Right-handed alpha
Helix 34	AD7	A	912	957	Right-handed alpha
Helix 35	AD8	A	963	967	Right-handed 310
Helix 36	AD9	A	969	984	Right-handed alpha
Helix 37	AE1	A	985	1001	Right-handed alpha
Helix 38	AE2	A	1005	1033	Right-handed alpha
Helix 39	AE3	B	11	22	Right-handed alpha
Helix 40	AE4	B	35	45	Right-handed alpha
Helix 41	AE5	B	105	115	Right-handed alpha
Helix 42	AE6	B	115	123	Right-handed alpha
Helix 43	AE7	B	130	150	Right-handed alpha
Helix 44	AE8	B	192	211	Right-handed alpha
Helix 45	AE9	B	216	235	Right-handed alpha
Helix 46	AF1	B	244	269	Right-handed alpha
Helix 47	AF2	B	276	309	Right-handed alpha
Helix 48	AF3	B	322	347	Right-handed alpha
Helix 49	AF4	B	351	367	Right-handed alpha
Helix 50	AF5	B	374	376	Right-handed 310
Helix 51	AF6	B	377	409	Right-handed alpha
Helix 52	AF7	B	413	424	Right-handed alpha
Helix 53	AF8	B	424	429	Right-handed alpha
Helix 54	AF9	B	430	437	Right-handed alpha
Helix 55	AG1	B	437	461	Right-handed alpha
Helix 56	AG2	B	467	472	Right-handed alpha
Helix 57	AG3	B	474	479	Right-handed 310
Helix 58	AG4	B	481	508	Right-handed alpha
Helix 59	AG5	B	510	550	Right-handed alpha
Helix 60	AG6	B	574	592	Right-handed alpha
Helix 61	AG7	B	597	631	Right-handed alpha
Helix 62	AG8	B	632	634	Right-handed 310
Helix 63	AG9	B	636	655	Right-handed alpha
Helix 64	AH1	B	656	661	Right-handed alpha
Helix 65	AH2	B	662	667	Right-handed alpha
Helix 66	AH3	B	668	707	Right-handed alpha
Helix 67	AH4	B	710	734	Right-handed alpha
Helix 68	AH5	B	738	768	Right-handed alpha
Helix 69	AH6	B	769	772	Right-handed 310
Helix 70	AH7	B	791	808	Right-handed alpha
Helix 71	AH8	B	822	832	Right-handed alpha
Helix 72	AH9	B	834	861	Right-handed alpha
Helix 73	AI1	B	868	876	Right-handed alpha
Helix 74	AI2	B	878	897	Right-handed alpha
Helix 75	AI3	B	912	936	Right-handed alpha
Helix 76	AI4	C	579	584	Right-handed alpha
Helix 77	AI5	C	585	607	Right-handed alpha
Helix 78	AI6	C	783	787	Right-handed 310
Helix 79	AI7	C	789	793	Right-handed 310
Helix 80	AI8	C	1035	1039	Right-handed 310
Helix 81	AI9	C	1042	1055	Right-handed alpha
Helix 82	AJ1	D	104	128	Right-handed alpha
Helix 83	AJ2	D	157	161	Right-handed 310
Helix 84	AJ3	D	248	250	Right-handed 310
Helix 85	AJ4	D	300	304	Right-handed 310
Helix 86	AJ5	D	522	534	Right-handed alpha
Helix 87	AJ6	E	5	17	Right-handed alpha
Helix 88	AJ7	E	43	52	Right-handed alpha
Helix 89	AJ8	E	92	98	Right-handed alpha
Helix 90	AJ9	E	102	106	Right-handed 310
Helix 91	AK1	E	119	145	Right-handed alpha
Helix 92	AK2	E	150	161	Right-handed alpha
Helix 93	AK3	E	187	194	Right-handed 310
Helix 94	AK4	E	195	214	Right-handed alpha
Helix 95	AK5	E	225	235	Right-handed alpha
Helix 96	AK6	E	263	268	Right-handed alpha
Helix 97	AK7	E	286	297	Right-handed alpha
Helix 98	AK8	E	319	339	Right-handed alpha
Helix 99	AK9	F	5	17	Right-handed alpha
Helix 100	AL1	F	43	52	Right-handed alpha
Helix 101	AL2	F	92	98	Right-handed alpha
Helix 102	AL3	F	102	107	Right-handed 310
Helix 103	AL4	F	119	145	Right-handed alpha
Helix 104	AL5	F	150	161	Right-handed alpha
Helix 105	AL6	F	187	194	Right-handed 310
Helix 106	AL7	F	195	214	Right-handed alpha
Helix 107	AL8	F	225	235	Right-handed alpha
Helix 108	AL9	F	263	268	Right-handed alpha
Helix 109	AM1	F	286	297	Right-handed alpha
Helix 110	AM2	F	319	339	Right-handed alpha
Helix 111	AM3	G	605	614	Right-handed alpha
Helix 112	AM4	G	636	662	Right-handed alpha
Helix 113	AM5	H	512	521	Right-handed alpha
Helix 114	AM6	H	543	569	Right-handed alpha
Helix 115	AM7	I	14	32	Right-handed alpha
Helix 116	AM8	I	34	51	Right-handed alpha
Helix 117	AM9	J	14	32	Right-handed alpha
Helix 118	AN1	J	34	51	Right-handed alpha
Helix 119	AN2	K	14	32	Right-handed alpha
Helix 120	AN3	K	34	51	Right-handed alpha
Helix 121	AN4	L	14	32	Right-handed alpha
Helix 122	AN5	L	34	51	Right-handed alpha
Helix 123	AN6	M	14	32	Right-handed alpha
Helix 124	AN7	M	34	51	Right-handed alpha
Helix 125	AN8	N	14	32	Right-handed alpha
Helix 126	AN9	N	34	51	Right-handed alpha

There are 28 sheets in PDB entry 6RLB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	63	first strand
Strand 2	A	50	56	anti-parallel
Strand 3	A	74	80	anti-parallel
Strand 4	A	95	101	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	558	560	first strand
Strand 2	A	570	572	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	785	789	first strand
Strand 2	A	775	782	anti-parallel
Strand 3	A	908	911	parallel
Strand 4	A	902	904	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	59	63	first strand
Strand 2	B	50	56	anti-parallel
Strand 3	B	74	80	anti-parallel
Strand 4	B	95	101	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	785	789	first strand
Strand 2	B	775	782	anti-parallel
Strand 3	B	908	911	parallel
Strand 4	B	902	904	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	528	534	first strand
Strand 2	N	54	69	anti-parallel
Strand 3	M	54	69	anti-parallel
Strand 4	M	81	87	anti-parallel
Strand 5	M	72	78	anti-parallel
Strand 6	M	6	13	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	60	66	first strand
Strand 2	M	54	69	anti-parallel
Strand 3	N	54	69	anti-parallel
Strand 4	N	81	87	anti-parallel
Strand 5	N	72	78	anti-parallel
Strand 6	N	6	13	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	540	545	first strand
Strand 2	L	54	68	anti-parallel
Strand 3	K	54	69	anti-parallel
Strand 4	K	81	87	anti-parallel
Strand 5	K	72	78	anti-parallel
Strand 6	K	6	13	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	72	78	first strand
Strand 2	K	54	69	anti-parallel
Strand 3	L	54	68	anti-parallel
Strand 4	L	81	87	anti-parallel
Strand 5	L	72	78	anti-parallel
Strand 6	L	6	13	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	551	557	first strand
Strand 2	J	54	69	anti-parallel
Strand 3	I	54	69	anti-parallel
Strand 4	I	81	87	anti-parallel
Strand 5	I	72	78	anti-parallel
Strand 6	I	6	13	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	82	88	first strand
Strand 2	I	54	69	anti-parallel
Strand 3	J	54	69	anti-parallel
Strand 4	J	81	87	anti-parallel
Strand 5	J	72	78	anti-parallel
Strand 6	J	6	13	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	630	631	first strand
Strand 2	C	1030	1033	anti-parallel
Strand 3	C	1018	1025	anti-parallel
Strand 4	C	1002	1010	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	643	649	first strand
Strand 2	C	656	662	anti-parallel
Strand 3	C	676	682	anti-parallel
Strand 4	C	691	695	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	699	704	first strand
Strand 2	C	711	716	anti-parallel
Strand 3	C	721	725	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	765	771	first strand
Strand 2	C	798	803	anti-parallel
Strand 3	C	808	811	anti-parallel
Strand 4	C	838	840	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	865	868	first strand
Strand 2	C	875	879	anti-parallel
Strand 3	C	885	889	anti-parallel
Strand 4	C	899	900	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	914	917	first strand
Strand 2	C	924	928	anti-parallel
Strand 3	C	933	938	anti-parallel
Strand 4	C	948	949	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	957	962	first strand
Strand 2	C	969	974	anti-parallel
Strand 3	C	978	983	anti-parallel
Strand 4	C	993	996	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	151	153	first strand
Strand 2	D	507	510	anti-parallel
Strand 3	D	498	501	anti-parallel
Strand 4	D	487	490	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	163	169	first strand
Strand 2	D	176	182	anti-parallel
Strand 3	D	195	199	anti-parallel
Strand 4	D	212	214	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	220	225	first strand
Strand 2	D	232	237	anti-parallel
Strand 3	D	242	246	anti-parallel
Strand 4	D	255	257	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	272	276	first strand
Strand 2	D	284	289	anti-parallel
Strand 3	D	295	298	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	337	342	first strand
Strand 2	D	350	354	anti-parallel
Strand 3	D	360	362	anti-parallel
Strand 4	D	384	387	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	395	399	first strand
Strand 2	D	408	412	anti-parallel
Strand 3	D	417	420	anti-parallel
Strand 4	D	429	431	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	438	442	first strand
Strand 2	D	450	455	anti-parallel
Strand 3	D	460	464	anti-parallel
Strand 4	D	475	476	anti-parallel

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There are 7 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	67	71	first strand
Strand 2	E	80	88	anti-parallel
Strand 3	E	33	38	parallel
Strand 4	E	109	116	parallel
Strand 5	E	181	186	parallel
Strand 6	E	216	218	parallel
Strand 7	E	256	257	anti-parallel

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There are 7 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	65	71	first strand
Strand 2	F	80	88	anti-parallel
Strand 3	F	33	38	parallel
Strand 4	F	109	116	parallel
Strand 5	F	181	186	parallel
Strand 6	F	216	218	parallel
Strand 7	F	256	257	anti-parallel

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There are 10 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	630	633	first strand
Strand 2	G	618	624	anti-parallel
Strand 3	G	689	693	anti-parallel
Strand 4	G	678	681	anti-parallel
Strand 5	G	667	674	anti-parallel
Strand 6	H	574	581	anti-parallel
Strand 7	H	585	589	anti-parallel
Strand 8	H	596	600	anti-parallel
Strand 9	H	525	533	anti-parallel
Strand 10	H	536	540	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6RLB

Analysis of interatomic Contacts of Structural Units in PDB entry:
6RLB