Analysis of interatomic Contacts of Structural Units in PDB entry:
6RMG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6RMG entry

There is 1 chain in PDB entry 6RMG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 46SER 799
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 6RMG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 52Right-handed alpha
Helix 2
AA2
A
57 68Right-handed alpha
Helix 3
AA3
A
77 97Right-handed alpha
Helix 4
AA4
A
98 114Right-handed alpha
Helix 5
AA5
A
115 119Right-handed 310
Helix 6
AA6
A
124 129Right-handed alpha
Helix 7
AA7
A
134 147Right-handed alpha
Helix 8
AA8
A
171 187Right-handed alpha
Helix 9
AA9
A
198 203Right-handed alpha
Helix 10
AB1
A
214 223Right-handed alpha
Helix 11
AB2
A
230 234Right-handed 310
Helix 12
AB3
A
235 242Right-handed 310
Helix 13
AB4
A
255 259Right-handed 310
Helix 14
AB5
A
260 271Right-handed alpha
Helix 15
AB6
A
275 285Right-handed alpha
Helix 16
AB7
A
289 294Right-handed alpha
Helix 17
AB8
A
339 342Right-handed alpha
Helix 18
AB9
A
350 352Right-handed 310
Helix 19
AC1
A
368 376Right-handed alpha
Helix 20
AC2
A
388 409Right-handed alpha
Helix 21
AC3
A
425 435Right-handed alpha
Helix 22
AC4
A
438 458Right-handed alpha
Helix 23
AC5
A
466 491Right-handed alpha
Helix 24
AC6
A
502 512Right-handed alpha
Helix 25
AC7
A
514 524Right-handed alpha
Helix 26
AC8
A
535 544Right-handed alpha
Helix 27
AC9
A
545 554Right-handed alpha
Helix 28
AD1
A
555 562Right-handed alpha
Helix 29
AD2
A
567 574Right-handed alpha
Helix 30
AD3
A
575 591Right-handed alpha
Helix 31
AD4
A
591 605Right-handed alpha
Helix 32
AD5
A
731 739Right-handed alpha
Helix 33
AD6
A
740 745Right-handed alpha
Helix 34
AD7
A
746 770Right-handed alpha
Helix 35
AD8
A
787 797Right-handed alpha
Helix 36
AD9
A
811 814Right-handed 310
Helix 37
AE1
A
815 826Right-handed alpha
Helix 38
AE2
A
827 829Right-handed 310
Helix 39
AE3
A
843 864Right-handed alpha
Helix 40
AE4
A
879 888Right-handed alpha
Helix 41
AE5
A
898 902Right-handed 310
Helix 42
AE6
A
909 913Right-handed 310
Helix 43
AE7
A
918 930Right-handed alpha
Helix 44
AE8
A
930 937Right-handed alpha
Helix 45
AE9
A
983 1005Right-handed alpha
Helix 46
AF1
A
1012 1017Right-handed alpha
Helix 47
AF2
A
1018 1020Right-handed 310
Helix 48
AF3
A
1023 1048Right-handed alpha
Helix 49
AF4
A
1050 1075Right-handed alpha
Helix 50
AF5
A
1080 1103Right-handed alpha
Helix 51
AF6
A
1110 1121Right-handed alpha
Helix 52
AF7
A
1123 1138Right-handed alpha
Helix 53
AF8
A
1139 1141Right-handed 310
Helix 54
AF9
A
1152 1168Right-handed alpha
Helix 55
AG1
A
1169 1178Right-handed alpha
Helix 56
AG2
B
71 76Right-handed 310
Helix 57
AG3
B
99 114Right-handed alpha
Helix 58
AG4
B
138 143Right-handed alpha
Helix 59
AG5
B
154 156Right-handed 310
Helix 60
AG6
B
157 169Right-handed alpha
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There are 6 sheets in PDB entry 6RMG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
228 229first strand
Strand 2
A
359 366anti-parallel
Strand 3
A
343 344anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
228 229first strand
Strand 2
A
359 366anti-parallel
Strand 3
A
154 161anti-parallel
Strand 4
A
418 422anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
326 328first strand
Strand 2
A
336 338anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 349first strand
Strand 2
A
353 356anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
972 978first strand
Strand 2
A
801 808anti-parallel
Strand 3
A
1007 1011anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 86first strand
Strand 2
B
122 126parallel
Strand 3
B
145 150anti-parallel
Strand 4
B
181 184anti-parallel
Strand 5
B
172 174anti-parallel
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