Analysis of interatomic Contacts of Structural Units in PDB entry:
6RMM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6RMM entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 8 chains in PDB entry 6RMM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 546SER 741
B
 HIS 546SER 741
C
 LEU 552SER 741
D
 LEU 552SER 741
P
 SER 360PRO 365
P
 PRO 367ASP 368
R
 SER 360PRO 365
R
 PRO 367ASP 368
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6RMM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
564 578Right-handed alpha
Helix 2
AA2
A
613 623Right-handed alpha
Helix 3
AA3
A
657 671Right-handed alpha
Helix 4
AA4
A
702 711Right-handed alpha
Helix 5
AA5
A
718 728Right-handed alpha
Helix 6
AA6
A
732 737Right-handed 310
Helix 7
AA7
B
564 578Right-handed alpha
Helix 8
AA8
B
613 623Right-handed alpha
Helix 9
AA9
B
657 671Right-handed alpha
Helix 10
AB1
B
702 711Right-handed alpha
Helix 11
AB2
B
718 728Right-handed alpha
Helix 12
AB3
B
732 737Right-handed 310
Helix 13
AB4
C
564 578Right-handed alpha
Helix 14
AB5
C
613 622Right-handed alpha
Helix 15
AB6
C
627 635Right-handed 310
Helix 16
AB7
C
657 671Right-handed alpha
Helix 17
AB8
C
702 712Right-handed alpha
Helix 18
AB9
C
718 728Right-handed alpha
Helix 19
AC1
C
732 741Right-handed 310
Helix 20
AC2
D
564 578Right-handed alpha
Helix 21
AC3
D
613 622Right-handed alpha
Helix 22
AC4
D
627 635Right-handed 310
Helix 23
AC5
D
657 671Right-handed alpha
Helix 24
AC6
D
702 712Right-handed alpha
Helix 25
AC7
D
718 728Right-handed alpha
Helix 26
AC8
D
732 741Right-handed 310
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There are 10 sheets in PDB entry 6RMM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
581 582first strand
Strand 2
A
557 560parallel
Strand 3
A
591 596parallel
Strand 4
A
607 612parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
674 675first strand
Strand 2
A
650 653parallel
Strand 3
A
694 697parallel
Strand 4
A
715 717parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
581 582first strand
Strand 2
B
557 560parallel
Strand 3
B
591 596parallel
Strand 4
B
607 612parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
674 675first strand
Strand 2
B
650 653parallel
Strand 3
B
694 697parallel
Strand 4
B
715 717parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
581 582first strand
Strand 2
C
557 560parallel
Strand 3
C
593 596parallel
Strand 4
C
610 612parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
674 675first strand
Strand 2
C
650 653parallel
Strand 3
C
694 697parallel
Strand 4
C
715 717parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
679 680first strand
Strand 2
R
362 363anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
581 582first strand
Strand 2
D
557 560parallel
Strand 3
D
593 596parallel
Strand 4
D
610 612parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
674 675first strand
Strand 2
D
650 653parallel
Strand 3
D
694 697parallel
Strand 4
D
715 717parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
679 680first strand
Strand 2
P
362 363anti-parallel
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