Analysis of interatomic Contacts of Structural Units in PDB entry:
6RMW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6RMW entry

There are 8 chains in PDB entry 6RMW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 46	LEU 430
B	GLN 46	LEU 430
C	ASN 37	ASN 431
D	GLN 46	LEU 430
E	VAL 45	ASN 431
F	ILE 44	ASN 431
G	TRP 47	HIS 429
H	GLN 46	LEU 430

There are144 helices in PDB entry 6RMW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	53	58	Right-handed alpha
Helix 2	AA2	A	60	76	Right-handed alpha
Helix 3	AA3	A	83	100	Right-handed alpha
Helix 4	AA4	A	104	110	Right-handed alpha
Helix 5	AA5	A	121	134	Right-handed alpha
Helix 6	AA6	A	135	138	Right-handed 310
Helix 7	AA7	A	144	159	Right-handed alpha
Helix 8	AA8	A	170	175	Right-handed alpha
Helix 9	AA9	A	184	196	Right-handed alpha
Helix 10	AB1	A	213	230	Right-handed alpha
Helix 11	AB2	A	235	237	Right-handed 310
Helix 12	AB3	A	262	266	Right-handed 310
Helix 13	AB4	A	274	296	Right-handed alpha
Helix 14	AB5	A	331	349	Right-handed alpha
Helix 15	AB6	A	370	382	Right-handed alpha
Helix 16	AB7	A	402	408	Right-handed 310
Helix 17	AB8	A	416	428	Right-handed alpha
Helix 18	AB9	B	52	58	Right-handed alpha
Helix 19	AC1	B	60	76	Right-handed alpha
Helix 20	AC2	B	83	100	Right-handed alpha
Helix 21	AC3	B	104	110	Right-handed alpha
Helix 22	AC4	B	121	134	Right-handed alpha
Helix 23	AC5	B	135	138	Right-handed 310
Helix 24	AC6	B	144	159	Right-handed alpha
Helix 25	AC7	B	160	163	Right-handed 310
Helix 26	AC8	B	185	196	Right-handed alpha
Helix 27	AC9	B	211	219	Right-handed alpha
Helix 28	AD1	B	219	230	Right-handed alpha
Helix 29	AD2	B	233	237	Right-handed 310
Helix 30	AD3	B	274	297	Right-handed alpha
Helix 31	AD4	B	331	349	Right-handed alpha
Helix 32	AD5	B	370	382	Right-handed alpha
Helix 33	AD6	B	385	387	Right-handed 310
Helix 34	AD7	B	402	408	Right-handed 310
Helix 35	AD8	B	416	429	Right-handed alpha
Helix 36	AD9	C	39	48	Right-handed alpha
Helix 37	AE1	C	52	58	Right-handed alpha
Helix 38	AE2	C	60	76	Right-handed alpha
Helix 39	AE3	C	83	100	Right-handed alpha
Helix 40	AE4	C	104	110	Right-handed alpha
Helix 41	AE5	C	121	134	Right-handed alpha
Helix 42	AE6	C	135	138	Right-handed 310
Helix 43	AE7	C	144	159	Right-handed alpha
Helix 44	AE8	C	184	196	Right-handed alpha
Helix 45	AE9	C	211	230	Right-handed alpha
Helix 46	AF1	C	234	237	Right-handed 310
Helix 47	AF2	C	262	266	Right-handed 310
Helix 48	AF3	C	274	297	Right-handed alpha
Helix 49	AF4	C	331	349	Right-handed alpha
Helix 50	AF5	C	370	383	Right-handed alpha
Helix 51	AF6	C	385	387	Right-handed 310
Helix 52	AF7	C	402	408	Right-handed 310
Helix 53	AF8	C	416	429	Right-handed alpha
Helix 54	AF9	D	52	58	Right-handed alpha
Helix 55	AG1	D	60	76	Right-handed alpha
Helix 56	AG2	D	83	100	Right-handed alpha
Helix 57	AG3	D	104	110	Right-handed alpha
Helix 58	AG4	D	121	134	Right-handed alpha
Helix 59	AG5	D	135	138	Right-handed 310
Helix 60	AG6	D	144	159	Right-handed alpha
Helix 61	AG7	D	160	163	Right-handed 310
Helix 62	AG8	D	170	175	Right-handed alpha
Helix 63	AG9	D	184	198	Right-handed alpha
Helix 64	AH1	D	211	219	Right-handed alpha
Helix 65	AH2	D	219	230	Right-handed alpha
Helix 66	AH3	D	234	237	Right-handed 310
Helix 67	AH4	D	262	266	Right-handed 310
Helix 68	AH5	D	274	297	Right-handed alpha
Helix 69	AH6	D	331	349	Right-handed alpha
Helix 70	AH7	D	370	382	Right-handed alpha
Helix 71	AH8	D	385	387	Right-handed 310
Helix 72	AH9	D	402	408	Right-handed 310
Helix 73	AI1	D	416	429	Right-handed alpha
Helix 74	AI2	E	52	58	Right-handed alpha
Helix 75	AI3	E	60	76	Right-handed alpha
Helix 76	AI4	E	83	100	Right-handed alpha
Helix 77	AI5	E	104	110	Right-handed alpha
Helix 78	AI6	E	121	134	Right-handed alpha
Helix 79	AI7	E	135	138	Right-handed 310
Helix 80	AI8	E	144	159	Right-handed alpha
Helix 81	AI9	E	160	163	Right-handed 310
Helix 82	AJ1	E	186	198	Right-handed alpha
Helix 83	AJ2	E	211	219	Right-handed alpha
Helix 84	AJ3	E	219	230	Right-handed alpha
Helix 85	AJ4	E	234	237	Right-handed 310
Helix 86	AJ5	E	262	270	Right-handed 310
Helix 87	AJ6	E	274	297	Right-handed alpha
Helix 88	AJ7	E	331	349	Right-handed alpha
Helix 89	AJ8	E	370	383	Right-handed alpha
Helix 90	AJ9	E	385	387	Right-handed 310
Helix 91	AK1	E	402	408	Right-handed 310
Helix 92	AK2	E	416	429	Right-handed alpha
Helix 93	AK3	F	53	58	Right-handed alpha
Helix 94	AK4	F	61	76	Right-handed alpha
Helix 95	AK5	F	83	100	Right-handed alpha
Helix 96	AK6	F	104	110	Right-handed alpha
Helix 97	AK7	F	121	134	Right-handed alpha
Helix 98	AK8	F	135	138	Right-handed 310
Helix 99	AK9	F	144	159	Right-handed alpha
Helix 100	AL1	F	160	163	Right-handed 310
Helix 101	AL2	F	184	196	Right-handed alpha
Helix 102	AL3	F	211	219	Right-handed alpha
Helix 103	AL4	F	219	227	Right-handed alpha
Helix 104	AL5	F	262	267	Right-handed alpha
Helix 105	AL6	F	274	297	Right-handed alpha
Helix 106	AL7	F	331	349	Right-handed alpha
Helix 107	AL8	F	370	383	Right-handed alpha
Helix 108	AL9	F	385	387	Right-handed 310
Helix 109	AM1	F	402	408	Right-handed 310
Helix 110	AM2	F	416	429	Right-handed alpha
Helix 111	AM3	G	52	58	Right-handed alpha
Helix 112	AM4	G	60	76	Right-handed alpha
Helix 113	AM5	G	83	100	Right-handed alpha
Helix 114	AM6	G	104	110	Right-handed alpha
Helix 115	AM7	G	121	134	Right-handed alpha
Helix 116	AM8	G	135	138	Right-handed 310
Helix 117	AM9	G	144	159	Right-handed alpha
Helix 118	AN1	G	160	163	Right-handed 310
Helix 119	AN2	G	184	198	Right-handed alpha
Helix 120	AN3	G	211	219	Right-handed alpha
Helix 121	AN4	G	219	230	Right-handed alpha
Helix 122	AN5	G	274	297	Right-handed alpha
Helix 123	AN6	G	331	349	Right-handed alpha
Helix 124	AN7	G	370	383	Right-handed alpha
Helix 125	AN8	G	385	387	Right-handed 310
Helix 126	AN9	G	402	408	Right-handed 310
Helix 127	AO1	G	416	428	Right-handed alpha
Helix 128	AO2	H	52	58	Right-handed alpha
Helix 129	AO3	H	60	76	Right-handed alpha
Helix 130	AO4	H	83	100	Right-handed alpha
Helix 131	AO5	H	104	110	Right-handed alpha
Helix 132	AO6	H	121	134	Right-handed alpha
Helix 133	AO7	H	144	158	Right-handed alpha
Helix 134	AO8	H	184	198	Right-handed alpha
Helix 135	AO9	H	211	219	Right-handed alpha
Helix 136	AP1	H	219	228	Right-handed alpha
Helix 137	AP2	H	235	237	Right-handed 310
Helix 138	AP3	H	262	266	Right-handed 310
Helix 139	AP4	H	274	297	Right-handed alpha
Helix 140	AP5	H	331	349	Right-handed alpha
Helix 141	AP6	H	370	382	Right-handed alpha
Helix 142	AP7	H	385	387	Right-handed 310
Helix 143	AP8	H	402	408	Right-handed 310
Helix 144	AP9	H	416	429	Right-handed alpha

There are 16 sheets in PDB entry 6RMW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	248	250	first strand
Strand 2	A	239	243	anti-parallel
Strand 3	A	199	203	parallel
Strand 4	A	166	169	parallel
Strand 5	A	389	393	parallel
Strand 6	A	410	413	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	301	304	first strand
Strand 2	A	308	312	anti-parallel
Strand 3	A	363	367	anti-parallel
Strand 4	A	356	360	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	257	260	first strand
Strand 2	B	248	253	anti-parallel
Strand 3	B	239	243	anti-parallel
Strand 4	B	199	203	parallel
Strand 5	B	166	169	parallel
Strand 6	B	389	393	parallel
Strand 7	B	410	413	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	300	305	first strand
Strand 2	B	308	313	anti-parallel
Strand 3	B	364	367	anti-parallel
Strand 4	B	356	359	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	258	260	first strand
Strand 2	C	248	252	anti-parallel
Strand 3	C	239	243	anti-parallel
Strand 4	C	199	203	parallel
Strand 5	C	166	169	parallel
Strand 6	C	389	393	parallel
Strand 7	C	410	413	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	300	305	first strand
Strand 2	C	308	313	anti-parallel
Strand 3	C	364	367	anti-parallel
Strand 4	C	356	359	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	257	260	first strand
Strand 2	D	248	253	anti-parallel
Strand 3	D	239	243	anti-parallel
Strand 4	D	199	203	parallel
Strand 5	D	166	169	parallel
Strand 6	D	389	393	parallel
Strand 7	D	410	413	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	300	305	first strand
Strand 2	D	308	313	anti-parallel
Strand 3	D	364	367	anti-parallel
Strand 4	D	356	359	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	258	260	first strand
Strand 2	E	248	252	anti-parallel
Strand 3	E	239	243	anti-parallel
Strand 4	E	199	203	parallel
Strand 5	E	166	169	parallel
Strand 6	E	389	393	parallel
Strand 7	E	410	413	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	300	305	first strand
Strand 2	E	308	313	anti-parallel
Strand 3	E	364	367	anti-parallel
Strand 4	E	356	358	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	258	260	first strand
Strand 2	F	248	252	anti-parallel
Strand 3	F	239	243	anti-parallel
Strand 4	F	199	203	parallel
Strand 5	F	166	169	parallel
Strand 6	F	389	393	parallel
Strand 7	F	410	413	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	301	304	first strand
Strand 2	F	308	312	anti-parallel
Strand 3	F	364	367	anti-parallel
Strand 4	F	356	358	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	259	260	first strand
Strand 2	G	248	251	anti-parallel
Strand 3	G	240	243	anti-parallel
Strand 4	G	200	204	parallel
Strand 5	G	166	169	parallel
Strand 6	G	389	393	parallel
Strand 7	G	410	413	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	300	305	first strand
Strand 2	G	308	313	anti-parallel
Strand 3	G	363	368	anti-parallel
Strand 4	G	355	360	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	258	260	first strand
Strand 2	H	248	252	anti-parallel
Strand 3	H	239	243	anti-parallel
Strand 4	H	199	203	parallel
Strand 5	H	166	169	parallel
Strand 6	H	389	393	parallel
Strand 7	H	410	413	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	300	302	first strand
Strand 2	H	308	313	anti-parallel
Strand 3	H	364	368	anti-parallel
Strand 4	H	355	359	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6RMW

Analysis of interatomic Contacts of Structural Units in PDB entry:
6RMW