Analysis of interatomic Contacts of Structural Units in PDB entry:
6RO8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6RO8 entry

There is 1 chain in PDB entry 6RO8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 19GLN 431
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6RO8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 30Right-handed alpha
Helix 2
AA2
A
35 41Right-handed alpha
Helix 3
AA3
A
41 46Right-handed alpha
Helix 4
AA4
A
46 53Right-handed alpha
Helix 5
AA5
A
68 78Right-handed alpha
Helix 6
AA6
A
84 89Right-handed 310
Helix 7
AA7
A
95 105Right-handed alpha
Helix 8
AA8
A
120 128Right-handed alpha
Helix 9
AA9
A
133 156Right-handed alpha
Helix 10
AB1
A
163 167Right-handed alpha
Helix 11
AB2
A
169 180Right-handed alpha
Helix 12
AB3
A
186 203Right-handed alpha
Helix 13
AB4
A
206 234Right-handed alpha
Helix 14
AB5
A
239 251Right-handed alpha
Helix 15
AB6
A
256 271Right-handed alpha
Helix 16
AB7
A
272 289Right-handed alpha
Helix 17
AB8
A
289 299Right-handed alpha
Helix 18
AB9
A
302 315Right-handed alpha
Helix 19
AC1
A
344 350Right-handed alpha
Helix 20
AC2
A
367 371Right-handed 310
Helix 21
AC3
A
383 402Right-handed alpha
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There are 3 sheets in PDB entry 6RO8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 58first strand
Strand 2
A
63 66anti-parallel
Strand 3
A
340 343parallel
Strand 4
A
320 324anti-parallel
Strand 5
A
82 83anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 162first strand
Strand 2
A
427 429anti-parallel
Strand 3
A
406 407anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
328 330first strand
Strand 2
A
333 335anti-parallel
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